KEGG   Folsomia candida: 110856719
Entry
110856719         CDS       T05043                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
fcd  Folsomia candida
Pathway
fcd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110856719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcd03041]
    110856719
Spliceosome [BR:fcd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    110856719
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st PRP4 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_like PSII_BNR
Other DBs
NCBI-GeneID: 110856719
NCBI-ProteinID: XP_021960936
LinkDB
Position
Unknown
AA seq 476 aa
MNFDDNTAIATAIKSGNINISTEYMSIEDHLDKEKQASLDELERRKRVRLMNVSTDDAEV
KKDLRTLGEPICYFGEGPADRRQRLKELLSRLGPEVLRRDVYEAVEKPSQDKYQGVTWYH
EGPESLRIAREWIAGYSIPRCRARLDEARQKRNIPDKIKIAQRQDLQKKMQVLTNQCSQV
GDSRPISYIQFSPNSQMLATASWSSLIKLWSVPDCTLIRTLKGHMNNVGAVVFHPHATTS
LMEDEACCLASCGADGSVKLWNLVSDEPKADVPGHNHRVSRIAYHPSGRFLGTCCYDSSW
RLWDLEQEEEVLHQEGHSKAVHCMSFQVDGSLAVTGGLDSFGRLWDLRTGRCVMFLDGHL
KSIYGIDFSPNGFHIATASEDHSTRIWDIRQRLSLYTIPAHTNLVSTCKFQPVDGNFIVT
SSYDKTAKLWLSSTWQPLKTLSGHDGRVMCVDISPDSQYIATSSFDRTFKLWSPDL
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgaatttcgacgataatacagccattgcgacggccattaagtccggaaacattaatatt
tctacggaatacatgtctatagaggaccacctcgataaagagaaacaagcaagtttagac
gaacttgaaaggagaaaacgtgtccggttaatgaatgtaagtactgacgatgcagaagta
aaaaaagatttaagaacactaggcgagcccatttgttactttggcgaaggtccggcagac
aggcgacagcgtttgaaggagttgctctcgaggttagggccagaggttttacgaagggat
gtctacgaggcggtggagaagccgtcacaggacaaatatcaaggcgttacgtggtaccat
gaaggccctgagagtttaagaatagcgagagaatggatcgcaggatattcaatcccacga
tgtagagctagattggatgaagctagacaaaaacgaaatattcctgataagataaaaata
gcacaacggcaagatttacaaaagaaaatgcaagtgcttacgaatcagtgcagccaggta
ggggattctcgaccgatttcttatattcaatttagtccaaactctcaaatgttggcaact
gcttcatggagcagccttatcaagttgtggtctgttccggattgcacattaataaggact
ctgaaaggtcatatgaataacgttggcgctgtagtgttccatcctcacgctacaacgtca
ctcatggaagacgaggcttgctgcttggcgtcgtgtggtgcggatggttcagtaaagttg
tggaatttggtgagtgatgagccaaaggcggatgttcctggacacaatcatcgagtatcg
aggatagcctatcatccctcgggacgctttctgggcacctgctgctacgattcttcatgg
agattgtgggatttggagcaagaagaggaagttttgcatcaggagggtcacagcaaggca
gtgcattgtatgtccttccaagttgatgggtcactcgcagtcacgggagggttggactca
tttggacgactctgggatttaaggactgggagatgcgtaatgtttctagatggtcatctg
aaatcaatatacgggattgatttctcccctaatggatttcatattgctactgccagtgaa
gatcactctactagaatttgggacattcggcaacgcttgtccttatacaccattccagcc
catacgaatttagtgtcgacatgcaaatttcagccagtcgacggaaattttatcgtaact
tcgtcgtatgacaaaactgctaagttatggctgagttctacctggcagcccttgaagaca
ttaagtggacatgacggtcgagtaatgtgcgtcgatatttcaccggattctcaatatatt
gcgacttcgtcgtttgaccggacgtttaaattatggtctccggatttgtaa

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