Folsomia candida: 110857037
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Entry
110857037 CDS
T05043
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
fcd
Folsomia candida
Pathway
fcd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110857037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcd03009
]
110857037
Ribosome biogenesis [BR:
fcd03009
]
Eukaryotic type
Pre-60S particles
RNases
110857037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
Zn_ribbon_4
LD_N
Motif
Other DBs
NCBI-GeneID:
110857037
NCBI-ProteinID:
XP_021961341
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MLPTHGLFRSIPCPYYVSGLCERPHCLFRHTKSDVLLARQADICATSDGEEEAEPAARET
INQQGGGRDKLVQVSRGVKRKAEDQAINENEGKSHCGEVIWIKGEAGGVGKSIHLPDKTA
ENKSRSSSGREGKESSKSSSRDHRHKSSSSSSSSSKRSSKSSSDNSKVQDKKSSSSSRDK
EDSNNHHRSHSSSSKSKSSDKSHKSSSSKSNSNNNKSSSSHKSSRSSSSSSKDKSKSKTL
SESRSRKSDSNDTIIKKESSSVTTVPDDDDDVRILDSSKAEDLELSSNAIYEDEENFNLP
QISDSEDDPDDIELECLRLFQDYQPEAKSPEKKIVVGNPALALQSDPGRKRQAHPGASEK
KATLPPSVRKSTFNLHEQIARRLESQKKVVNSRIEETKKIIPSSSFVQKATHQTMSGTQS
LSSGPSTVGNKKRIAHVPNVSGLLKSPSIPVDNKTPLKSSGSTSTSSSYSTASITLSRTS
DKGVPRVAHSTIIYATNKNKGPLVNIDAPAKGIGKIPVLSRQKVLDQLFEAAMLVHDNQS
DAFQRAIDEEATIQVRSKTKAVYTSLAVSKVRTIRKEAEDQHNQLNQEGQSSTSPGAKRD
KDPSIRPTGQSLYQGLKNVVLKEEDLVANGFPRSHPNGEPGCAVATLGLWNTEYVSEQTR
RTCDRCHKVFNVDETGIQAANEGSCVYHSGKKTSQQVNRAWKVIFSCCGDERGSSGCSTA
TFHVPKSHPVASTRGFVSAVQSMGSDETMGTNRWDVVAIDCEMVYTTGGSELARATFLDK
DGEVIYDELVKPQHPVLDYNTKYSGLTESIMEGVTNTLNSVQAVLLTQLKPNSILIGHSL
ESDLIALRVKHDYVVDTSLLYPHRRGLPYKKALKMLSQEHLRKLIQESVDGHDSAEDARA
ALDLAVLYVQQNTQCH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctacacacggcttatttcgctcaattccctgcccttactacgtctcgggccta
tgtgaacgcccccactgtctttttcggcacactaaatcggacgtgctcctcgccaggcag
gcagatatttgtgcgacgagtgacggagaagaagaagctgaacccgcagcgcgagagact
atcaatcaacaaggaggcggccgagataagcttgtacaagtatcgagaggagtaaaaagg
aaggcggaggatcaagcgataaacgagaacgaggggaaatctcattgcggggaggtaatt
tggataaagggtgaagctggtggtgtagggaaatctattcatcttcctgataagactgct
gagaacaagagtcgtagtagtagtgggagggaagggaaggagtcatcaaagtcgtcttct
agggaccacaggcacaaaagtagtagtagcagcagtagcagtagcaaaaggtcgtctaaa
agcagctcggataatagcaaagttcaagataagaaaagttcaagctcatcacgggataag
gaggactcgaataatcatcatcggtcgcactcttcatcgtcaaaatcaaagtcttcagat
aaatcgcataagtccagctcgtcaaaatccaacagtaacaataataagtcatcttcatct
cataaatctagtcggagtagtagcagcagcagcaaagacaaatcaaagagcaaaaccttg
agtgagtcccggtctagaaagtctgattcgaatgacactataattaagaaagaaagctcg
tctgtcactacagtacctgatgatgatgatgatgtaaggatccttgattcaagtaaagct
gaggatttagaattatcatcgaacgcaatttacgaagacgaagagaactttaatttgcca
caaattagtgactctgaagacgacccagatgatattgagctggaatgcctaagacttttt
caagactatcagccagaggctaaatcaccagagaaaaaaatagtagtaggaaatccagca
ttagctctgcaaagtgaccctggtaggaagaggcaagcacatccaggagcgtccgaaaag
aaagcgacattacccccttcagtcaggaaatctactttcaacttgcatgaacaaattgcg
aggagacttgaatctcagaagaaggttgttaacagtcgaattgaagaaaccaagaagatt
atccctagttcatcttttgtacaaaaggcaacacatcagaccatgagtgggactcaatct
ctatcgtcgggtccaagtacagttggtaataaaaagcgaatagcgcatgtgccaaatgtc
tctggattactgaagtcgccatcaatcccggtggataacaagacccctttaaaatctagt
ggtagtacatccacgagctcatcatattcaacagccagtataactctctcgcgtacctcc
gacaaaggagtcccccgtgttgcgcactccacgataatttatgcaactaataaaaacaaa
ggccctctggttaacattgacgctcctgcaaagggaattggtaaaattcccgtcctgtca
cggcagaaggtgctggatcagctttttgaagccgcaatgctcgtccacgacaatcagtcg
gacgcgtttcagcgagccattgacgaggaggctaccattcaagttaggtctaaaacaaaa
gcagtctacacaagtcttgctgtcagtaaagttaggactattagaaaggaggcagaagat
caacataaccagctaaatcaagagggtcaatcttcaacatcccctggtgctaagcgtgac
aaagatccctccatccgacccactggacagtccctttaccaagggctgaaaaatgtcgtt
ctaaaagaagaggaccttgtggccaatggcttccctagatctcatcctaatggggaacct
ggttgtgctgtagccacgttagggctttggaatacggagtatgtttcagaacaaacgcga
cggacctgtgatcgatgtcacaaggtttttaacgtcgatgaaactggcattcaagcagcc
aatgaaggttcgtgcgtttatcattcaggaaaaaagacatcacaacaggtaaaccgagcc
tggaaggtgatcttctcatgttgtggtgatgaaagagggtcttcaggctgctccacggca
acctttcacgttccaaagtcacatccggtcgcttcaacaagaggattcgtctctgcggtc
caatccatgggatccgacgagacgatgggaaccaatcggtgggacgttgttgcgatagac
tgtgaaatggtctacactactggaggtagcgaactggcccgagccaccttcttggacaag
gacggcgaagtcatctatgacgaattagtaaaacctcaacatccagtattagattataac
accaagtacagtggccttactgagtccataatggagggcgttaccaacacactgaactca
gttcaagccgtcttattgacccagttgaagcctaactccattttaatcgggcatagtttg
gagtccgatctgattgccctgcgagtgaaacatgattatgtagtcgacacgtcgctttta
tatccacaccgacgaggcctaccttacaagaaagctctgaaaatgttatcccaagagcat
ttacgaaaattgatccaagagtctgtagatggtcacgacagtgccgaggacgctcgcgcg
gcattggatcttgctgttctttatgttcagcagaacacacagtgccattag
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