Folsomia candida: 110858502
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Entry
110858502 CDS
T05043
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
fcd
Folsomia candida
Pathway
fcd03018
RNA degradation
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110858502
09123 Folding, sorting and degradation
03018 RNA degradation
110858502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110858502
03041 Spliceosome [BR:
fcd03041
]
110858502
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110858502
mRNA degradation factors
5'-3' decay
Lsm complex
110858502
Spliceosome [BR:
fcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110858502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
110858502
NCBI-ProteinID:
XP_021963004
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MASSTATNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDYVNMVLEDVTEYEQT
TEGRRITKLEQILLNGNNITMLIPGGEMPDA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatccacagcgacaaacccttcaaccctcctaccactcgagttggtggacaaa
tgtatcggatccagaatccacataataatgaagaacgacaaggagattgtggggacgttg
ttgggatttgacgactatgtgaacatggtgttggaggatgtcaccgagtatgagcagacg
accgaagggcgacgcattacaaagctggaacaaattctcctcaatgggaacaacatcacg
atgttgataccgggtggagagatgccagacgcataa
DBGET
integrated database retrieval system
