Folsomia candida: 110858644
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Entry
110858644 CDS
T05043
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
fcd
Folsomia candida
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcd03041
]
110858644
03016 Transfer RNA biogenesis [BR:
fcd03016
]
110858644
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110858644
Spliceosome [BR:
fcd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110858644
Transfer RNA biogenesis [BR:
fcd03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110858644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
110858644
NCBI-ProteinID:
XP_021963165
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MTAFEEMGMMGELARATEDMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
LQSVWETLKEIREGRSGGGNTSSSSSSSSKWALSVYDRGSAFAISPDGLRCQSREFKDWH
GCRGTKGVVGKGAYYFETIVQDEGLCRVGWSTHQASHELGTDRYSFGFGGTGKKSHCKQF
DDYGEPFGKSDVIGCCLDLDRSEVRFTKNGKDFGVAFQIPASLRGEIIYPAVVLKNAEIL
FNFGDQAWKHEPPKGFIGLAQVQEDQLVQVKSNPNHGANKGAQQPLKNVSNAPQAIIMEP
SRELAEQTFTQIQKFKKYLDAPPIRELLVIGGVAVRDQIEALSRGVDIVVGTPGRLEELI
GSGHISLAHTRFFILDEADGLLKAGYTQLIHKMHGQIPKVTADMKRLQMIVCSATLHDFE
VKKLAEKLMYFPTWVDLKGEDAVPETVHHVVVPVDPRKDLSWHSLRQHVTTDGVHAKDNV
RPGSNTAETFSEAVKLLKGEYCVRAIDKMKMDQALIFCRTKIDCDNLEEYLVTRGGGPRS
VSNPYTCVCLHGDRKPAERKENLERFKKKDVKFLICTDVAARGLDISGLPFMINITLPDE
KSNYVHRIGRVGRAERMGLAISLVATVPEKVWYHGQWCSSRGKNCWNTNLTDRKGCCVWY
NEQQYLADIEEHLIVTIPQVEPDMNIPCDEFDGKVVYGQKRSLQDACGKYHLTETASSLQ
QLTRLEKETQNFYLTRQLAPNLAIK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtttgaggagatgggaatgatgggggagttggccagagccaccgaagacatg
gactggaccctccccactgatgttcaagctgaagcaattcccctcatccttggcggcggt
gacgttcttatggctgcggaaacggggtccggcaaaacaggagccttttgtcttccagtc
cttcaatctgtttgggagacgctgaaggagattcgcgaggggagaagcggagggggcaat
actagcagttcatcctcctcatcatccaaatgggcattgtctgtgtacgatcgtggctcg
gcatttgcaataagtccggatggactacgttgccagtcacgtgagtttaaggattggcat
gggtgtcgtgggacgaagggtgtggtgggaaagggggcctactattttgaaacaattgtc
caagatgaagggttgtgcagagtgggttggtctacacaccaggccagtcatgagctgggc
acggatcgttacagtttcggttttggtggaactgggaagaaatcgcattgcaaacagttt
gacgattacggagagccatttggaaaatcggatgttattggatgttgtctcgacctggac
cggagtgaagtacgattcactaaaaatggaaaagactttggcgtagcattccaaattcct
gcgagccttcgaggtgaaatcatttaccctgcagtggttctaaaaaatgccgaaatacta
ttcaattttggcgaccaagcatggaagcacgagcctcccaagggattcattggcttggca
caagttcaagaggaccagctcgtgcaggtcaagagtaatccgaaccatggagccaacaaa
ggagctcaacagcctctaaaaaacgtgtcaaatgcgcctcaagctatcatcatggagcct
tcccgtgaactggccgaacaaacttttacacaaattcaaaaatttaaaaagtacttggac
gctccccccatccgagaattgttggtcattggaggagttgctgtgcgtgatcagattgaa
gctctcagtcgaggcgtcgacattgttgtggggactccaggacggttggaagagctcatc
ggttcaggccacatctcactcgctcacacccgattcttcatcctcgacgaggctgacggt
ctcctgaaagcagggtacacccaactcattcacaaaatgcacggtcaaattcccaaagtc
actgcagatatgaaacgacttcaaatgattgtgtgttccgccacgttacacgattttgaa
gtgaagaaactggctgaaaagctcatgtactttcctacctgggttgacctgaaaggtgaa
gacgccgtaccggaaactgtgcaccatgttgtggttcccgtggaccctaggaaggatttg
tcctggcactccctccgccaacatgtgaccacagacggggttcacgccaaagacaatgtc
cgtcccggatcaaacacggccgaaacattttccgaggctgtgaagctcctaaagggagag
tactgtgtgagagccattgacaaaatgaaaatggaccaagcactcatcttttgccggacc
aagattgactgtgataatttggaagagtatctcgtgacgagaggtggtggcccacgaagt
gtgagcaatccgtacacttgtgtctgtctgcacggggaccgaaaaccagcagagcgaaaa
gaaaacttggaacggttcaagaaaaaagacgtgaaatttctcatttgcacggatgttgct
gccagaggactcgacatttctggacttcctttcatgataaacataactctgcccgatgag
aagtccaactacgttcaccggattgggcgagtaggtcgtgcagagcggatgggcttggca
atttcgttggtggccacagttccggaaaaggtgtggtatcatgggcagtggtgctcgagt
cgtggaaagaactgttggaacacgaacctcactgatcgcaagggctgctgcgtctggtac
aatgagcaacaatacttggccgacattgaagaacatttgattgttacgattccacaagta
gaaccagacatgaacattccgtgtgatgaatttgacggcaaagtggtttatggtcaaaag
cgatctttacaagatgcctgtgggaagtaccacctcacggagacagcgtcatcccttcag
cagctaacacgtcttgagaaagagacacagaatttctatctaactcgacaattagcccca
aatctcgcaataaagtaa
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