Folsomia candida: 110859934
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Entry
110859934 CDS
T05043
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
fcd
Folsomia candida
Pathway
fcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110859934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcd03000
]
110859934
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110859934
04121 Ubiquitin system [BR:
fcd04121
]
110859934
Enzymes [BR:
fcd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110859934
Transcription factors [BR:
fcd03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
110859934
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110859934
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110859934
Ubiquitin system [BR:
fcd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110859934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-RING_2
zf-C3HC4_3
Baculo_IE-1
zf-UDP
zf-CCCH
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110859934
NCBI-ProteinID:
XP_021964665
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MAIEFIKKQTTKKMLQTSSSSSSTSSSSPNSSNSTEQECPLCMETLDLDDKSFFPCTCGY
QICRFCWHRILTSSSSSTDSSNSCPACRKTYSENPANFKPISVEDIQLKLKQQRKLKDLQ
KKAKTVEGRKHLGELRVVQKNLVFVVGITPRIADAELLKKGEYFGRFGKIHKVVVNCVSA
SSAGATAAGTTPCSSSTTNTTTSGLSYGAYITYTRSEDALRAIQSVNNIPFDGKTIKASL
GTTKYCSHFMRNQICPKGDCMYLHSQGDSEASFTKEDMQQGKHQEYERKLIEEFRREQQR
EKEQVEGGEVISEQQKVEQQQQPKPLMIPLLYKSDFNVNGFEEEEVEEEEVEERNGRQDL
VGDFSTRDEEEQQQRDYSPPPPPPPQHILPPPVQTHTAHAPPPLQPPQLTPPQLTAPPLD
FNPFSETQSQFESIIQAEMANWQLSQQHTHHSARQNHPPPPGFDNNLDEWIDPAIIYSKS
MNSRSHQQGQQQVGQGGRGGNGGGNIGHLLGNSLLNDIFCAGGSNNAAVVEQQQQRHFLP
PQQQQYYPPQQQPHTYYKPPPGFQPPSPAAGQLPALPPQQQFINNNFFNNFPF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgaattcatcaaaaaacaaaccacgaaaaaaatgctccaaacctcgtcctcc
tcctcttcaacatcctcctcctcacccaactcctccaactcaacggagcaggagtgcccc
ctttgtatggagacgttggacctggatgataagtccttttttccttgcacttgtggctat
cagatctgccgcttctgctggcaccggatcctcacctcctcctcctcctccacggactct
tcaaactcttgccccgcctgtcgcaagacctactccgagaaccctgccaatttcaaaccc
atctccgtcgaggacattcaactgaaattgaaacagcagaggaagctgaaggacctgcag
aaaaaagcaaagaccgtcgagggaaggaaacacctcggagagttgagagtggtgcagaaa
aacttggttttcgtcgtcgggatcacgccgaggatcgcggatgcggagttattgaagaag
ggagagtactttgggaggttcgggaagatccacaaggtggttgttaattgtgtgagtgcg
agttcagcgggtgcgacggcggcggggacgacgccctgcagctcctccacaactaacacc
accacttctggcctctcctacggcgcctacataacctacacccgctctgaggacgccctc
cgcgccatccaatccgtgaacaacatccctttcgacgggaaaaccattaaagcttcattg
ggaacgaccaagtactgctctcacttcatgcggaatcaaatctgtcccaagggggactgc
atgtatctgcatagtcagggggactcggaggcgagtttcactaaagaggacatgcagcag
gggaagcatcaagagtacgagaggaagttgattgaggagtttaggagggagcagcaaagg
gagaaggagcaagtggagggtggggaagtgatttctgagcagcagaaggtggagcaacag
caacagccgaagcccttgatgataccgttgctttacaagagtgattttaatgtcaatggg
tttgaggaggaggaggtggaggaggaggaagttgaggagcggaatggaaggcaggattta
gtcggggatttttcgacacgcgacgaggaagagcagcagcaaagggattattcaccacct
ccgccgcctccaccgcagcacatcctcccaccacccgtacagacacacaccgcgcatgcg
ccaccacccctacaaccaccccaactaactcccccgcaattaaccgctcctcccctggac
ttcaaccccttctcggaaacccaatcccagtttgagtccataatccaggcggagatggcg
aattggcagttgtctcagcaacacacgcatcattcagcgaggcagaaccaccctcctccg
ccagggttcgacaacaatttggacgagtggatcgacccggccattatttacagcaagtcc
atgaatagtaggagtcaccagcaggggcagcagcaggtgggtcaaggagggaggggagga
aatggaggagggaatataggacacttgttggggaacagtttgcttaatgatattttctgt
gctggtgggagtaacaatgccgccgtggtggagcagcagcagcagagacacttcctcccc
cctcagcaacaacaatactatcctccccaacaacagccacacacctactacaaaccaccc
ccgggattccaaccaccctcccccgccgccggccagctccccgctcttcctcctcaacaa
cagtttataaataataatttttttaataatttccccttttaa
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