Folsomia candida: 110861051
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Entry
110861051 CDS
T05043
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fcd
Folsomia candida
Pathway
fcd03013
Nucleocytoplasmic transport
fcd03015
mRNA surveillance pathway
fcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110861051
09122 Translation
03013 Nucleocytoplasmic transport
110861051
03015 mRNA surveillance pathway
110861051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110861051
03041 Spliceosome [BR:
fcd03041
]
110861051
03009 Ribosome biogenesis [BR:
fcd03009
]
110861051
03012 Translation factors [BR:
fcd03012
]
110861051
Enzymes [BR:
fcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110861051
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110861051
mRNA cycle factors
Stress granule specific factors
110861051
Spliceosome [BR:
fcd03041
]
Complex C
Other components
EJC/TREX
110861051
Ribosome biogenesis [BR:
fcd03009
]
Eukaryotic type
90S particles
Helicases
110861051
Translation factors [BR:
fcd03012
]
Eukaryotic type
Initiation factors
eIF-4
110861051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
ResIII
AAA_30
TIP49
Helicase_RecD
Terminase_3
UvrD-helicase
Cas3-like_C_2
AAA_11
CMS1
Motif
Other DBs
NCBI-GeneID:
110861051
NCBI-ProteinID:
XP_021965854
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAAASASTSKRRIPEEDEDLTQVNLVTGCNVQTFESMGLKEDLLRGISAQGFKKPSAIQQ
LAIKPIIQGRDVLVQREPGTGKTTALSIGILQSVDSTKRETQFLILSPTSERAIQIQKVI
LALGDYLNIQCHRSIGGTNLGEDMRKVDYGQHVVSGTPGRVFDMIRRECLRTKAIKMLVF
DEAEELLNKGFKNLIYDIYRSLHRSTQIILFSTTMPHEILEMARRWMSDPVRILDKRDNL
ASALRGVKHFFVAVDHEEWKLDTLCDVYGTLPISQAVIFCNTKAKVNWLAEKMRERNFTV
SLIHEEMPQKERDAVMKNFRNQATRVLITSEAWASGNDVKQVSLGINYDLPNSPELYAHR
ICRSGRLDGKGVSISFVKEAEIQILRDIEQHYSTKSDEMPANIADLV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcatctgcctccacgtcaaaacgccgaattccggaggaggacgaggatttg
acccaggtcaacctcgtaactggttgtaatgttcaaacgtttgagtcaatggggctcaag
gaggacttgctgaggggaatttccgctcaagggttcaagaaaccttcagcgatccaacaa
ctcgcaataaaaccgattatccaaggtcgagacgtgcttgttcaaagggagcctggaact
ggcaaaactacggccttatctattggaattttgcaatctgtggactctacaaagagggaa
actcagttcttgatcttatctccaacatcagaaagggctattcaaattcaaaaggttatt
ctggcattgggcgattacttgaacatacagtgtcataggagcattgggggaaccaatctt
ggagaagatatgcgaaaagtagattatggacaacacgtggtatctggaaccccaggcaga
gtttttgatatgattagacgagaatgcctgcgaacaaaggctattaaaatgcttgtgttt
gacgaagccgaagaactgctgaataaagggttcaaaaacctgatttatgacatctacaga
agccttcatcgttcaacgcagatcatccttttctctactacgatgccgcatgaaatcttg
gaaatggccagaagatggatgtctgatcccgtccgaatccttgacaaacgggacaatttg
gcttcggcattacgcggagtgaagcatttctttgtggctgtggatcacgaagaatggaaa
ttggacaccttgtgcgacgtgtacggtaccctcccgatttcgcaagccgttatcttctgt
aacaccaaggctaaggttaattggttggcggagaaaatgcgtgaacggaatttcaccgtt
tctttaattcacgaggaaatgccacaaaaggagcgggatgctgttatgaagaattttaga
aatcaagcaacccgagtactaattacgagtgaggcttgggcgagtgggaatgacgttaag
caagtttcactgggtataaactacgatcttccaaacagtccggaattatatgctcaccgg
atttgtcggtctggtcgtttggatgggaaaggtgtctcgatcagttttgtaaaggaggct
gaaattcagatcttgcgagatattgagcagcactattccaccaagagtgatgagatgcca
gcgaacattgcagatttggtctaa
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integrated database retrieval system
