Folsomia candida: 110861755
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Entry
110861755 CDS
T05043
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
fcd
Folsomia candida
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcd03021
]
110861755
03036 Chromosome and associated proteins [BR:
fcd03036
]
110861755
Transcription machinery [BR:
fcd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110861755
Chromosome and associated proteins [BR:
fcd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110861755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_9
SH2
Tex_YqgF
HHH_3
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
110861755
NCBI-ProteinID:
XP_021966573
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MSFLGDEAEESEHEGEEEIGHVRKYKNKDKRKKQIDSDEEEEDDDEEVLKDLIDDNPIEE
DSDNESDGSRKRKKSDEEDDFDDRLEEDDYDLLEENLGMKVKRKKSFKRIRQDAESDVED
SQEQGDDREAIANQLFEGSDNENERPSRREEAPEQYASDESEVESETDDFIVDDDGQPIA
DKRKKRKPIFTDAALQEAQDIFGVDFDYEDLDKEDKEEYDEDEEDEDEYENEEQNIARRT
KKALRRKKKLKSLYELYEPHELERAGITEEDNRIRNTDIPERMQLRVVPITPADEDELEE
EAEWIFKMAESHISTAASGAPQKSNIQIMEEYKPKVVAKIRKALEFMRNQHLEVPFIAFY
RKEYIQPELQINDLWKIYKLDGRYCQLKLRKTRLSILFKNMQMYQTDLIMENADEQISDA
VRIISEDDIDRIRSLKTSEELDDMYLLFSLYYADDVQLMKEAMVKKRLEAKQRAREVAAA
EGEPVEDPDDLDSDPIEFPSTKRKIGGGSYALCKKLGIDSLVKKFGLTPDRFAENLRDSY
QRYEVEQYPMDPLDTAKEYMNERLKTQEEALKAAKFMLATQMSREPLVRLSVREVFFECA
TITVTPTKKGLREIDEAHPCYAMKYIKGKPVRDLKQDQFLKLTMAEEDKLINLVIGDQIK
GITGDTYVEEVVQLFRRDEYSKLVQEWNDIRAECCQFALEKLLYPIFQKELRAKLLDEAK
EYVIDTATHKLNEWLKVAPYSVNFADENEEDWDTSKGIRVLAIAYVPDFSQASFATVISP
AGEPSQFIRLQNIMKSLKSFNESDRKDKSEDLRSIKELIVAKKPHVVVIGGESRDAIMIK
EDIRNLIADLSTEDGFPAINVEIVDNELAKVYASSIRAQTDFREYPLILRQAISLGRRMQ
DPLIEFSQLVNHDDEIMCLRFHPMQDQVAKEELLESLLTQFVNRTNEVGVDINRCISSPF
TMNVAQFICGLGPRKAVALVKTLKQNSQRLENRTQLITVCHMGPKIFINCSGFIKIDTNS
LGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDSNPASALEEILETPDRLEELN
LDAFAEELTRQGFGNKSITLYDIRSELNARYKDHREHYTTPNAEQLFNMLTKETPETLYR
GKLTTATVVGISHKKPQGEQLDDAILVRSEETDMWKCAFCMKNDFPDLSDVWNHFDAGAC
PGQTAGIRIRLDNGVSGFISLGKLSDKTVTNPDDRVKRGQTIHCRIVKIDVHRFSVECTS
RTSDLVDDDQKWRLPKDPYYDAEAEDKDKKQEEEVRKKKHYQTYVRRVIVHPAFKNISFK
ELTPIMETMYQGDLIIRPSSKGSDHLTVTWKVTDSICQHIDVLETKKENMFSLGRSLHIG
SEEYEDLDEIIARCINPMASHSRQLVSYKYYVKNLGGSLAMADEYLKEEKKKNSNKIHYV
IHPSKEFPGKFVLSYLPGNKVLHEFITVNPSGFRYRHQSFPTLNATLKWFKEHYMEPPPS
TPITTPATNVAASSATAQQHGMFVPPPPPSSHFALRTTPHYTTPALGLTPYSAFTTPYTP
TAQTPYITPYQTPYQGTPWESDPQTRAPFVNSSNGFNNSGQKFQQKTNMIRVSRDEQSND
DGNDWRKAADAWAKSQQRRPQRPLDFQRNDDNPNLQPLGSRQHISDPALRSSMLPFRKTG
EGLRGEHHAYGSSAHNLLPNPSHRSGRDSLKSTPHTNYSPRSMVESSSGDETPLYDEK
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctcggtgacgaagctgaagagtcagagcacgaaggagaagaagagattggg
cacgtcaggaagtacaagaataaagacaaacgtaaaaagcaaattgacagtgacgaagag
gaggaagatgatgatgaggaagtgttgaaagatcttatcgatgataatcctatagaggag
gacagcgataatgagtctgatgggtcgcggaagagaaagaaaagcgatgaggaggatgac
tttgacgatcgcttggaagaagatgattatgatcttctcgaggagaatttgggaatgaaa
gtcaaacggaaaaaaagctttaagagaattcgacaagatgcggaatcggacgttgaagat
tcacaggaacagggcgatgatcgggaagccattgcgaaccaactctttgaaggatctgat
aatgagaatgagcgcccgtcacgacgagaagaagcaccagaacaatacgcttctgacgag
tctgaagtggagtcggaaacggatgatttcatcgtagatgatgacggtcagcctattgca
gataagcgaaagaaaagaaagccaatttttactgatgctgccctccaagaagcccaggac
atatttggagttgactttgattatgaggatttggacaaggaagataaggaagagtatgat
gaagatgaggaggacgaggatgagtatgaaaatgaagagcaaaacatcgcaaggagaaca
aagaaagcattaaggcggaagaagaagctcaagtccctctacgaattgtacgaacctcat
gaattagaaagagctgggattacggaagaagacaatcgaattagaaacacagatatccca
gaacgtatgcaactccgcgtcgtccccatcactcccgccgacgaagacgaacttgaggag
gaggcagagtggatatttaagatggcagagtctcatatcagcacggcggcgagtggtgcc
ccccaaaaatctaatattcaaattatggaggagtataagccaaaagtggtggcaaaaatt
aggaaagcacttgagttcatgagaaatcagcacttggaagtcccgttcatcgcgttctat
cgcaaagagtatatccaaccagaactgcaaattaacgatttgtggaaaatttacaagcta
gatgggcgctattgccagttgaaattaagaaagacaagactaagcatcctgttcaaaaat
atgcaaatgtatcagactgatttgataatggaaaatgcagatgagcaaatttcagatgct
gtgcgcataatttccgaagacgatattgatcgtattagaagcttaaaaacgtcggaagag
cttgacgacatgtatctgctcttcagtctctactacgcggatgacgtgcagttaatgaag
gaagcgatggtaaagaaacggctggaagctaagcaacgagcaagggaagtggctgctgca
gaaggcgaaccagtcgaagatccagacgaccttgactcggatcctattgagtttccatca
accaaacgaaaaattgggggtggatcttacgctctatgcaaaaagttgggaattgacagc
cttgtcaagaaatttggattgactccagacaggtttgctgaaaatttgcgagactcgtat
caacgatatgaagtggagcaataccccatggacccgctggacacggcaaaagaatatatg
aacgaaagactgaaaactcaggaggaggcattgaaggcggccaagttcatgttggcgacg
caaatgtctcgagaaccactggtcaggttgagcgtgagggaagtgttctttgaatgtgcc
accattacagtgaccccaacaaagaaagggctccgtgaaattgatgaagcacacccttgt
tatgcaatgaagtacatcaaaggtaaaccagtccgagatttaaagcaggaccaattttta
aagctgacgatggcagaagaagacaagttgatcaatttggtgattggtgaccaaatcaaa
gggatcaccggagatacttatgtggaggaagttgttcaactattcaggagagatgagtac
agcaaacttgttcaagagtggaacgacatccgagcagaatgttgccaatttgcactggag
aaactcttgtatccgatttttcaaaaagaattgagagcaaagttgctggatgaagccaaa
gaatatgtcattgacactgctactcataaactgaacgaatggctcaaagttgcaccttac
tcggtcaattttgccgacgaaaatgaagaagactgggacactagtaaaggaattcgtgtt
ttggccattgcctacgttcccgatttcagccaagcttccttcgccacagtgatctctcct
gctggagagccatcccagtttattcgccttcaaaacatcatgaagagtctcaaatccttt
aatgaatctgaccggaaggataaatcagaagatttaaggtcaattaaggaattgattgtc
gccaaaaagccacatgtggttgtgattggtggagaatcccgtgatgcaataatgattaag
gaagacattcgaaatttgattgccgaccttagcacggaggatggtttcccagcaattaat
gtagagattgtggataatgagttggcaaaagtctatgctagctctattagggctcagact
gattttcgtgaatatcctctcatcctgaggcaagcaatttctctcggtcggaggatgcag
gacccactgatagaattttcgcaacttgtgaatcatgacgatgaaattatgtgcctaaga
tttcatcctatgcaggatcaagttgcaaaagaagaattgttggagagtttattaacgcag
tttgtgaatcgaacgaacgaggtaggggttgacataaatcgttgcatttctagtcccttt
accatgaacgtggcacagtttatttgtggactgggacccaggaaagctgtagcactcgtt
aagacactgaagcaaaatagccaacggcttgaaaatcgaacccagcttatcacagtgtgt
cacatgggacctaaaatattcattaattgctccggctttatcaaaattgacaccaattct
cttggggatagtacggaagcctacgtcgaagtattggacggctccagagtgcaccctgaa
acttatgaatgggcccgtaaaatggctgtggatgctttagagtacgacgacgaagattca
aaccctgccagtgcactagaggaaattctggaaactccagatcgattggaggagctgaat
ttagatgcttttgctgaagagttgacacgtcagggtttcggaaacaagagcattactctt
tacgacatccgttctgaacttaatgcccgttacaaggatcacagagaacactacacgact
ccaaatgctgagcagcttttcaacatgctcaccaaagagactcccgagacgttgtacaga
ggaaaacttacaactgccaccgttgtcggtatatcgcataagaagccacaaggagagcaa
ctcgatgatgcaattctagttagaagtgaagaaacggacatgtggaaatgtgctttctgc
atgaaaaatgactttcctgatttatctgatgtttggaaccattttgatgcgggtgcttgt
cctggtcaaactgctgggatacgaatccgacttgataacggggtcagtggcttcatttca
cttgggaaactgtccgacaaaactgtaaccaatccggacgacagagtcaagcgtggccaa
actatacattgcagaattgtgaaaatagacgtgcatcgattcagcgttgagtgcacatca
cgaacgagtgatctggtcgacgatgaccaaaaatggagactgccaaaggatccgtactat
gacgccgaggctgaagataaggataagaagcaggaggaggaagtcaggaagaagaagcac
tatcaaacctatgtccgcagggtcattgtacatccagcgttcaagaatatttcatttaaa
gagcttactccgataatggagacgatgtatcagggcgatttgatcatacgaccctccagt
aagggctcggaccacttgaccgtgacttggaaagttacagactccatttgtcaacatatt
gatgtgctcgaaacaaagaaagaaaacatgttcagtctcggtcggtcgttgcacattgga
tcggaagaatatgaggacttggacgaaattattgctcgttgcataaatcctatggcttcg
cactcaagacaattagtttcctacaaatactacgtcaagaatcttggcggaagcctggcc
atggcagatgaatatctaaaagaggagaagaagaaaaattcgaataagattcactatgtt
attcatcccagcaaggagtttccaggaaaattcgtcctatcataccttcctggaaacaaa
gttctgcatgaattcatcaccgtgaatccatctggcttcagatatcgtcaccaatcattc
ccgactttaaatgctacattaaagtggttcaaggaacattacatggaacctccgcccagc
acccctattaccacaccggcgaccaatgttgcggcatctagcgccactgcacaacaacat
ggcatgtttgttccaccgccaccaccatccagccattttgcattacgtactactccacat
tacaccaccccagcactagggttgactccatattctgcattcactacgccatacacacca
acagcccaaactccatacatcactccgtaccagaccccttaccaaggaactccgtgggag
tcggatccgcaaaccagggccccatttgtaaattcttctaatggcttcaataactcggga
cagaagttccagcaaaaaacaaatatgataagagtatctagagacgaacaatctaacgat
gatggtaatgattggcgtaaggctgcagatgcctgggcaaaatcacaacagcgccgccca
caacgaccgctggattttcagagaaatgatgacaaccccaacttacaaccactcggatca
aggcagcatatatcggacccggctttacgaagcagtatgctaccattccgtaaaacaggg
gaagggttacgaggagagcaccatgcttatgggtcatccgcacataatttgcttccaaat
ccttctcatcgatctggccgtgacagtttgaaatcaactcctcacaccaactatagcccg
cgatcaatggtagaaagctcatcgggcgatgaaactccactttatgatgaaaagtaa
DBGET
integrated database retrieval system
