Folsomia candida: 110863420
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Entry
110863420 CDS
T05043
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
fcd
Folsomia candida
Pathway
fcd03013
Nucleocytoplasmic transport
fcd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110863420
03015 mRNA surveillance pathway
110863420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcd03019
]
110863420
Messenger RNA biogenesis [BR:
fcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110863420
mRNA cycle factors
P-body specific factors
110863420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
AGRB_N
KilA-N
Motif
Other DBs
NCBI-GeneID:
110863420
NCBI-ProteinID:
XP_021968419
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MGKKKGLRVGPLTCDVKSDITPTKPTLSSSSAITVSQAASNRQASLENLSMDVDYESPLE
KLMNKAIDEPTLKVFAQTWNSEVEAKLKLLESNKNPVYEEYEKLISSKKLDSNLKKCTGF
VRKLKQYTEFQKSSIENDVKTLNLTKYLTEIAAAFSEARYKIENVNDAVTICSLVHQRYS
DFSPMLVEEFKKNLPKRADVTPSVLSKLSVDVRMIGELVMCGVMPRNEGCQLLCSFLRNL
VATDREGLQCLIPIMSFAAGLGDPYLGVLPRRISALCQEHGVALSRYDLFKDDFKTVFKN
IVYDYFGVVAKALVNIHTEKQRSELHNRKLLRSKGEIPTDRKEVHMGIVAKFDKYLGTAT
KFSDLLDSDLPVLVDLPADPEEEEEKAMLRSESGELMDTVPGIIIFEEEETRSFYQDFKD
LKVYLPPVAYRESVQQAAEETERIKEREKALNDFDDAVETAELAEEEEGESRAEEEATTD
GDAELPPSLRNDGEGKESDVPIKPNFQDYLDKLGNSCGRNTIDKCALEFAENHNTKPNRK
KLVHTMFRIPRQRIDLIPFYSRMVAILNPVMPDMGLELCRLLKNDFYFLVKKKHQIFIET
KLKIVRFIGELVNFRIFPKSDALKCLKFLLMNFVHHQIEMACVFVETCGRMLYRTPDSHR
RMKIYLEEMIRKKTVKSLEQRYTCMIDHAYSIVLPREEAPRVEKKLTPIELFLYPILVED
LSKSTYQAALRFLKCIPWDDAWISEVACRCMTQPWQLTHQQLQLQAQLLLDLNKLEPFVV
TRIVDIVMEELRRGLENPSVHYNQRRFTTLSYLAELYYYRLIRSDTLFDVMYLLITYGVS
WDFNKQTTMDPPDNIGRIRLASFLLKDCGEYLNNGKNKRRLHLFLLHMQKYLWLKRSLPF
WNAKGVRFPFGIYESFVEAASKHCPKLKFAGSFEEAREFLEEMEDDVDEESKQFGGKLPK
LMPVSETTGLLPFADPMQKYNEMQQQLAASRASNGKYNGDNGGFGADTIFEEDESEMDPY
ERAAAKARNLQRQHHQKYNMCPEDEEFEALFEKMCSEVVYTGKQMKTEITIPLHISNSAH
STSEMKSNRCDGAAGEQTGNNPDAPPGTVNFTLMTKKGNKQQFKSIPVPADSELVQRIRT
RDELERAEKESVKMRTLAISRLQEAEEHQRELDVIQSAFNQPPRQQSAPRDVPINKSKPL
LKKTVQVREDCDGVADGSDGEPWGGGNAGWTKGGVSWDEGSDAWGGRGDNVPDNRGYQKL
TDANHKQFKRWTKNNKSKIVHEEGETEKGKFKPHSRRGQK
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaagaaagggttacgagtcggtcctctcacctgcgacgtgaagagcgatata
acacctacgaaaccaaccttgtcgtcgtcctcagccatcacggtctcacaagcggcatcc
aatcgacaagccagtttggaaaacttaagtatggatgttgactatgagtctccgctggaa
aaattaatgaacaaggcgattgatgagcccactctgaaagtctttgctcaaacgtggaac
agcgaggttgaggcgaaactgaagcttctggaatcaaacaaaaatcctgtctatgaagaa
tatgaaaagttaatcagctctaaaaagttggattctaatctaaaaaagtgtaccggattc
gtccgaaaattgaaacaatacaccgagtttcaaaaatcgtcgatagaaaatgatgtcaag
acactgaacctcacgaagtatttgactgaaattgctgcagcatttagtgaagctcgttat
aagattgaaaatgtgaacgatgctgtaacaatttgttccctggtgcatcaaagatattca
gacttttcgcccatgcttgtagaagaatttaagaaaaatttgcccaaaagggcagacgta
actcctagcgttcttagcaagttatcagtcgatgtgcgcatgattggtgaactcgtcatg
tgcggcgtcatgccaaggaatgaaggatgtcagttgttatgctcattcctgcgaaatctg
gtcgctacggatcgtgaagggttgcagtgtctcattcccatcatgtcctttgcagccgga
ttgggtgatccgtacttgggcgtccttcctcgccgaatttcggccctatgtcaagagcac
ggcgtggcgctatctagatacgacctttttaaggacgactttaaaaccgtgttcaaaaac
attgtctacgattatttcggagttgtggcaaaggctttggtgaatatacacacggagaaa
caaaggtctgagttacacaatcgcaaactgttgcgctccaagggggaaataccaacagat
cggaaagaggtgcacatgggaatcgtggccaagtttgacaaatatttgggaactgcaacc
aaattttcagacctgttagacagtgacctaccagtgttggtagatttgcctgccgatccc
gaggaggaggaggaaaaggcaatgttgcggtctgaaagtggcgaactaatggacactgtg
cctggaataatcatctttgaagaagaagagacccgatcattctatcaagactttaaagat
ttgaaagtctacttgcccccggtcgcttaccgcgagagcgttcaacaagctgcggaggag
actgaacgaatcaaagagagagaaaaggctttgaatgactttgacgatgcggtagaaact
gccgagttggcggaagaagaagagggagaaagtcgtgccgaggaggaggcgacgaccgat
ggtgatgcagaattgcctccatctttaagaaatgatggagaaggcaaagagagcgatgtg
ccaatcaaaccaaattttcaagactatctggacaaactgggaaactcttgcggtcggaat
acgattgacaagtgtgccctcgagtttgctgagaaccacaatactaaaccgaatagaaag
aaattagtgcacacaatgttccgcattcctcgtcagcgcattgacttaattccattctac
agtcgcatggtagccattctcaatccagtcatgcccgacatgggtctcgagctttgtcgc
ctcttaaaaaacgatttctacttcctcgtaaagaaaaaacatcaaatatttattgaaaca
aagctcaaaattgttcgctttatcggagaactagtcaatttccgcatctttccgaaatct
gatgctctcaagtgcttaaagttcctcttgatgaattttgtccatcaccaaattgagatg
gcgtgcgtctttgtggaaacatgtggtcgaatgttatacagaacaccggactctcatcgt
aggatgaaaatttatctggaagaaatgataagaaagaagactgtcaagagcctggagcag
cgctacacttgcatgattgatcacgcttactcgatagtgctcccaagggaagaggctccg
cgagttgagaagaagttgactccaatcgaactctttttataccctattctggtcgaggat
ctctccaagagcacgtatcaggcggcgctccgttttttgaaatgcataccgtgggatgat
gcttggatttctgaggttgcgtgtcgctgtatgacacaaccttggcagctcacacatcaa
cagttgcaactgcaggctcaattgctacttgatctgaacaaattggagccattcgtcgtc
actaggatagtcgatattgtgatggaagagcttagacgaggattagagaatcctagcgtg
cactacaatcaacgtagatttactacactttcgtaccttgcagagctgtactactatcgg
ctaatcaggagtgataccttatttgatgtcatgtaccttttgataacgtacggtgtgtcg
tgggactttaacaagcaaactacaatggatccacccgataacattgggcgaattcgtctc
gcaagcttcttgctcaaagattgtggtgaatatctcaacaatggaaagaataagaggaga
ctgcacctgtttctgttgcatatgcagaagtacttatggctgaaaagaagtctcccgttt
tggaacgcaaagggagtccgatttcccttcggaatttatgaatctttcgttgaagcagcc
agtaagcactgtccaaaactgaagtttgcaggaagtttcgaagaggctagagaattcttg
gaagaaatggaagacgatgtcgacgaggaatctaagcaatttggcggaaaattaccaaaa
ctgatgcccgtatctgaaacgactggtttactgccatttgctgacccaatgcaaaagtac
aacgaaatgcaacagcaactagctgctagtcgtgcaagtaatgggaagtacaacggcgat
aacggaggatttggtgcagacacgattttcgaagaggatgagagtgaaatggacccgtac
gaacgtgccgcagccaaggcgagaaatctgcaacgccaacaccatcaaaagtacaacatg
tgcccggaagatgaagagtttgaagcgctgtttgaaaaaatgtgctctgaagtcgtctac
actgggaaacaaatgaagactgagataacgatcccactccacatcagtaattcggctcat
tccacgtccgaaatgaaaagcaaccgctgtgatggtgctgctggggaacagactgggaac
aacccagatgctcctcctggcacagtgaatttcaccctcatgaccaaaaagggaaacaaa
caacagttcaaaagcatccccgttcctgccgacagcgaattagtacaaagaattcgtact
cgggacgagttggaacgcgccgagaaggagagcgtcaaaatgcgaacccttgccatcagt
cgactccaagaggcggaagaacatcaacgggaattggacgtgatccagtctgccttcaat
cagcctccacgccagcagtccgcgccgcgggacgtacccatcaacaagtccaagcccttg
ttgaaaaagactgttcaagttcgcgaggactgtgatggcgtcgccgatgggagtgatgga
gaaccctggggtggtggtaatgcggggtggactaaggggggtgtcagttgggatgagggt
agtgacgcttggggcgggcgtggtgacaatgtgcccgataatagaggctatcaaaaactc
actgacgctaaccataaacaatttaaacgatggacgaagaataacaagtccaaaatcgtg
catgaagagggcgaaacggaaaagggcaagtttaaacctcattctcgacgtggtcaaaaa
taa
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