Flagellatimonas centrodinii: JN531_001765
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Entry
JN531_001765 CDS
T07957
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
fce
Flagellatimonas centrodinii
Pathway
fce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JN531_001765 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fce03400
]
JN531_001765 (uvrB)
DNA repair and recombination proteins [BR:
fce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JN531_001765 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JN531_001765 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ULQ47023
LinkDB
All DBs
Position
complement(351057..353105)
Genome browser
AA seq
682 aa
AA seq
DB search
MSDSATKVVRLRSRRDEPFQIKADWAPAGDQPAAIRQLIEGLNDGLAHQTLLGVTGSGKT
FTIANVIAAVQRPTLIMAPNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSD
TYIEKDSAVNEHIEQMRLSATKALMTRKDAIIVASVSAIYGLGDPDAYFQMVLHLIKGER
MPQRELIKQLTAMQYTRNEVALDRGTYRVRGDVIDIHPAESDDEAVRVELFDDEVESLSF
FDPLTGEVKRKVPRLTVFPKSHYVTPRERTLAMISDIREELQERIAHFRKVEKLIELQRI
EQRTQFDLEMINEIGYCKGVENYSRYLSGRAPGQPPPTLFDYLPPDALVVLDESHVTVPQ
IGGMYRGDRNRKETLVEYGFRLPSALDNRPLKFEEFEAICPQTIHVSATPGPYELEHSVG
AIAEQVVRPTGLVDPEIDVRPAGRQVDDVLGEIRLRAEREERVLVTVLTKRMAEDLTDYL
GENGVRVRYLHSDVDTVERAEIVRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKE
GFLRSDRSLIQTIGRAARNLNGRAILYADRMTGSMQRAIDETNRRREKQVAFNLANGITP
KGIQKRVQDVMRLGYEDTAVAMKAAEARARYDAIVPPELLARQIAKLEKEMKQAALNLEF
EKAAKLRDEVRKLREQAIVHAA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccgccaccaaagtcgtccgcctgcgcagccgccgggacgagccattccag
atcaaggccgactgggcgcccgccggtgaccagccggcggccatccgtcagctcatcgag
gggctcaatgacggcctggcgcaccaaacgctgctgggggtcaccggctcgggcaagacc
ttcaccatcgccaacgtgattgccgcggtgcagcgaccgacgctgatcatggcgcccaac
aagaccctggctgggcagttgtatggcgagttcaaggagttcttccccaacaacgccgtc
gagtacttcgtcagctactacgactactaccagcccgaggcctacgtgccgtcgtcggac
acctatatcgagaaggactcggcggtcaacgagcatatcgagcagatgcgcctgtcggcc
accaaggcactgatgacgcgcaaggacgccatcatcgtcgccagcgtctcggccatttac
ggcctgggcgacccggatgcctatttccagatggtgttgcacctgatcaagggcgagcgg
atgccgcagcgcgagctgatcaagcagctcaccgcgatgcagtacacccgcaacgaggtt
gcgctggaccgcggcacctaccgggtgcgcggcgacgtgatcgacatccacccggccgaa
tctgacgacgaggcggttcgggtagagctgttcgatgacgaggtcgagagcctgagtttt
tttgacccgcttaccggcgaggtcaagcgcaaggtgccgcggctgacggtctttcccaag
tcgcactacgtcacgccgcgcgagcgcactttggcgatgatcagcgatatccgcgaggag
ttgcaggagcgcatcgcccatttccgcaaggtcgagaagctcatcgagcttcagcgcatc
gagcagcgcacccagtttgacctggagatgatcaacgagatcgggtactgcaagggggtg
gagaactactctcgctacctgtcgggccgggcaccggggcagccgccgccgacgctcttc
gactacctgccgccggatgcactggtggtgctggacgaaagccatgtcacggtgccgcag
atcggcggcatgtaccgcggcgaccgcaatcgcaaggaaactctggtggaatacgggttc
cgcctgccgtcggcgctggacaaccgccccctcaagttcgaggaattcgaggcgatctgc
ccgcagaccattcatgtgtcggccacccctggcccctacgagcttgagcattcggtgggg
gcgattgccgagcaggtggtgcgccccaccgggctggtcgaccccgagatcgatgtccgc
ccggcgggccggcaggtcgatgacgtgctcggcgagatccgcctccgtgccgagcgcgag
gagcgggtgctggtcaccgtgctgaccaagcgcatggcggaggatctcaccgactatctc
ggcgagaacggcgtgcgggtgcgttatttgcactccgatgtcgataccgtcgagcgggcc
gagatcgtccgcgacctgcggttgggcgtgttcgacgtgctggtcggcatcaacctgctg
cgggaggggttggacattcccgaggtgtcactggtggcgatcctcgatgccgacaaggaa
ggcttcctgcgctccgaccgctcattgatccagaccatcggccgcgccgcccgcaacctc
aatggccgcgccattctctacgccgaccgtatgaccggctcgatgcagcgggccattgac
gaaaccaaccgccggcgcgagaagcaggtggccttcaacctggccaacggcatcacgccc
aagggtattcagaaacgggtgcaggacgtgatgcgcctgggctatgaagacacggctgtg
gcaatgaaggcggcggaggcccgcgcccggtacgatgccatcgtcccgccggagctgttg
gccaggcagattgccaagctggagaaggagatgaagcaggcggccttgaatctcgagttc
gagaaggccgccaaactgcgcgacgaggttcgcaaactgcgcgagcaggcgatcgtccac
gccgcctga
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