Flagellatimonas centrodinii: JN531_002740
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Entry
JN531_002740 CDS
T07957
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fce
Flagellatimonas centrodinii
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fce03009
]
JN531_002740 (rimO)
Enzymes [BR:
fce01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JN531_002740 (rimO)
Ribosome biogenesis [BR:
fce03009
]
Prokaryotic type
ribosomal protein modification factors
JN531_002740 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ULQ47209
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All DBs
Position
563754..565085
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AA seq
443 aa
AA seq
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MTATPAPKVGFVSLGCPKALVDSERILTQLRAEGYQTAPDYDDAQVVIVNTCGFIDSAVE
ESLEAIGEAMAENGKVIVTGCMGVGSHRDRIREKFPDVLSISGPQDFASVMTALHTALPP
QHDPFLDLVPPQGVKLTPRHYAYLKISEGCNHQCSFCIIPGMRGRLVSRPVDAVLREGER
LVQAGVKELLVISQDTSAYGVDLKYAPGTWQGREYRARLKDLCEGLGSLDAWVRLHYVYP
YPHVDDIIPLMAEGRLLPYLDIPFQHGAPSVLKRMKRPAAAENTLERIRAWRAVCPDITL
RSTFIVGFPGETEAEFQTLLDWLEEAQLDRVGCFTYSAVEGATANALPDPVPEAVKQERQ
ARFMEAQARISAARLQAKVGREIDVLVDGFDEDGYLVGRSQADAPEIDGKVYLSTSLELE
AGDIVRCEVIAADEHDLNAEVIG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccacccctgcccccaaagtcggctttgtctccctcggttgcccgaaggccctg
gtcgactccgagcgcatcctcacccagctgcgggccgaggggtatcagaccgccccggac
tacgacgacgcccaggtggtcatcgtcaacacttgcggcttcattgactcggccgtggag
gagtcactggaggcgatcggcgaggccatggccgaaaacggcaaggtcatcgtcacgggc
tgtatgggcgtcggcagccaccgcgaccggattcgcgagaagtttcccgacgtgctgtcc
atcagcggaccgcaggacttcgccagcgtgatgacggcactgcacacggccctgccgccg
cagcacgatccgtttctcgatctggtaccaccgcagggcgtgaaactgacgccgcgccac
tacgcctatctgaagatctccgaaggctgcaaccatcagtgcagcttctgcatcattccc
ggcatgcgggggcggctggtgtcacggccggtggacgcggtgttgcgcgagggtgagcgt
ctggtccaggccggcgtcaaggagttgctggtcatctcccaggacaccagcgcctacggc
gtcgatctcaagtacgcgcccggcacctggcagggccgcgagtaccgcgcccgcctgaag
gacctctgcgagggtctgggcagcctcgatgcctgggtccgcctgcactatgtctatccc
tatccgcatgtcgacgacatcatcccgttgatggccgaagggcggctactgccctatctc
gacatcccctttcagcacggggcgccgtcggtgctgaaacggatgaaacgaccggccgcc
gccgagaacaccctcgagcgcatccgcgcctggcgcgcagtctgtccggacatcaccctg
cgcagtaccttcattgtcggctttcccggcgaaaccgaagcggagttccagaccctgctc
gactggctggaagaagcccagctcgaccgcgtcggctgtttcacctattcggcggttgaa
ggcgccaccgcaaacgcgctgcccgatccggtgccggaagccgtgaagcaggagcgtcag
gcccgtttcatggaagcgcaggcgcggatcagcgccgcccggctacaggcaaaagtgggc
cgcgagatcgatgtgctggtcgacggcttcgacgaggacggatacctggttggccgctca
caggccgacgcgccggaaatcgatggcaaggtctacctgtcgacctcgttggaattggag
gcgggagacatcgtccgctgtgaggtgatcgcggccgacgagcacgacctcaacgccgag
gtaatcggctag
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