Flagellatimonas centrodinii: JN531_003040
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Entry
JN531_003040 CDS
T07957
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fce
Flagellatimonas centrodinii
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fce03400
]
JN531_003040
DNA repair and recombination proteins [BR:
fce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JN531_003040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_10
AAA_22
AAA_30
ResIII
Hydrolase
T2SSE
AAA_16
AAA_25
DUF5852
TrwB_AAD_bind
AAA_7
AAA_19
DUF1633
Motif
Other DBs
NCBI-ProteinID:
ULQ47268
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Position
complement(635653..637182)
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AA seq
509 aa
AA seq
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MNDRVLIGKGDTAQTLLARYANRHGLVAGATGTGKTVTLQVLAEGFSALGVPVFCADVKG
DLSGLAAAGEAKPKLAERAAELGVAGYAPAPQPVVFWDVFGQQGHPIRTTISEMGPLLLA
RLLALSDAQTGVLAVAFKFADDNGLALLDFKDLTALLRHVGENAKAIGQQYGLVSTASVA
AIQRALLQLEQEGGAALFGEPALELPDLMRTDLSGRGIINVLAADQLFARPRLYATFLLF
LLSELFESLPEVGDLDRPRLVFFFDEAHLLFKDAPRALVDKVEQVVRLIRSKGVGVYFVT
QNPLDLPDAVLGQLGNRVQHGLRAFTPRDQKAVRAAAETFRANPGLDVEAAITEMGVGEA
LISTLQDKGIPSPVERAKVAPPRSRMGPLTDEERRVVLSRSPLAGRYEVLVDRESAYELL
ARKAEEAEARAAADAEAAARADDWNAQVTAAYGSGTRSRKPSAAPRRRAAPQSMAEKAMQ
SAVRSAGSAVGREVGRQLLRGLFGSLLKR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccgcgttctgatcggcaagggcgacaccgcccagaccctgcttgcccgctac
gccaaccgccacggcctggtggcgggtgccaccggcaccggcaagacggtcacattgcag
gtgctggcggagggcttttcggcgctcggtgtgccggtgttttgcgcggatgtgaaaggg
gacctgtcagggttggcggccgcgggtgaagccaagcccaagctggcggagcgcgccgcc
gagctgggggtggcgggttacgcgccggcgccgcagccggtggtgttctgggatgtcttc
ggtcagcaggggcacccgatccgcaccaccatttcggaaatggggccgctgctgctggcg
cggctgttggcattgtcggacgcacagaccggggtgctggcggtggccttcaagttcgcc
gacgacaacggcctggcactcctggacttcaaggacctgaccgcgctgctgcgccatgtc
ggcgaaaacgccaaggccatcgggcagcaatatggtctggtcagcaccgcctcggtggcg
gccatccagcgcgccctgctgcaactggagcaggagggtggggccgcgctgttcggcgag
ccggcgctggaactgccggacctcatgcgcaccgacctgtcgggtcgcggcatcatcaac
gtgctggcggccgaccaactgttcgcccggccgcggctctacgccaccttcctgctgttt
ctgctgtcggagctgttcgaaagcctgccggaagtgggcgacctcgaccggcccaggctg
gtgttctttttcgatgaagcccatctgctgttcaaggatgcgccgcgcgcactggtggac
aaggtggagcaggtggtgcggttgatccgctccaagggggtcggtgtgtacttcgtcacc
cagaacccgctggacctgccggatgcggtgctgggccagttgggcaaccgggtgcagcat
ggcctgcgtgcctttaccccgcgtgaccagaaggccgtgcgcgcggcggccgaaaccttc
cgtgccaacccggggctggacgtggaggccgccatcaccgagatgggggtcggcgaggcg
ctgatctccaccctgcaggacaaggggatccccagcccggtggagcgcgccaaggtggcg
ccgccgcgttcacggatgggcccgctgaccgacgaggagcgccgcgtggtgctgtcgcgc
agcccgctggcgggccgctacgaggtgctggtggaccgggagtcggcctacgagttgctg
gcccgcaaggccgaggaggccgaggcccgcgccgccgccgatgccgaagcggcggcccgc
gccgatgactggaacgcacaggtgaccgcggcctatggcagtggaacccgctcccgcaag
ccttcggccgcgccgcggcggcgggcggcaccgcagagcatggcggagaaggccatgcag
tcggcagtgcgcagcgccggcagtgcagtgggccgcgaagtcggccgccagttgttgcgc
ggcctgttcggctcgctgctgaagcgatag
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