Flagellatimonas centrodinii: JN531_003170
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Entry
JN531_003170 CDS
T07957
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fce
Flagellatimonas centrodinii
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fce03400
]
JN531_003170
Enzymes [BR:
fce01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JN531_003170
DNA repair and recombination proteins [BR:
fce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JN531_003170
Prokaryotic type
JN531_003170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ULQ47293
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All DBs
Position
672967..674379
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AA seq
470 aa
AA seq
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MSRTALVWFRRDLRLNDHPALQAALAAAERVIPVFVYAPDEEAPWAPGGAANWWLHHSLA
ALSARLAALGSPLVIRRGPTLEALRALISETGADRIFWNRLYEPAVRTRDAAIKEALRED
GLTVESFNSALLFEPWTLQTQSDQPYRVFSPFWRNAEPRLVDVRAPTPAPTALPGPAKAV
SSEPLETLALLPRLPWADGFRARWTPGEAGALARLTPFLDGPVQQYRQRRDLPGDDDGTS
GLSPHLHFGEIGPAQVLAATRARGPLNPQVQHFIREIGWREFAHHLLYHYPQTPTEALYH
DKFGAFPWRSAADYADNLRAWQRGETGIPIVDAGMRQLWATGWMHNRVRMVVASFLTKNL
LTPWQEGAAWFWDTLVDASLANNTLGWQWSAGCGADAAPYFRIFNPLLQSERFDADGAYL
DAWVPELRSLSGKHKHMPWTAPVPPKGYPAPIVDLAATRDRALAAYDRIK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaccgcgcttgtctggttccgtcgcgacctgcgactgaacgatcatccggcc
ctccaagcggcactggcggcggcggaacgggtgattccggtgttcgtatacgcacccgac
gaggaagcgccctgggcccctggcggggccgccaactggtggttgcatcacagtctggcc
gcgctatcggcgcggctggcggcgctgggcagcccgctggtaattcgccgcgggccgacg
ctggaggcgctgcgcgcgctgatctccgagaccggcgccgaccggatcttctggaaccgc
ctctacgaaccggccgtgcgtacgcgggacgcggccatcaaggaggccctgcgtgaggac
ggcctgaccgtcgaaagcttcaacagcgcgctgttgttcgaaccctggaccctgcagacc
cagagcgaccagccctaccgcgtgttctcaccgttctggcgcaacgccgaaccgcggctg
gtcgacgtgcgcgcgcccacgccggccccgacggcactaccggggccggcgaaggccgtc
tccagcgagccgctggagacactggcgttgctgcccaggctgccgtgggccgatggtttc
agggcacgctggaccccgggtgaggccggcgcgctggcccgcctgaccccgtttctcgac
ggcccggtgcagcagtaccggcaacgccgcgacctgcccggcgacgatgacggcacctcg
ggactgtcgccgcatctgcatttcggcgagatcggcccggcgcaggtgctggcggccacc
cgggcacgggggccgctgaatccgcaggtccagcatttcattcgcgagatcggctggcgc
gagttcgcccaccatctgctctaccactacccgcagacgccgaccgaagcgctgtatcac
gacaagttcggcgccttcccctggcgcagcgctgccgactacgccgacaacctgcgggcc
tggcagcgcggcgaaaccggcatccccatcgtcgacgccggcatgcgccaactgtgggcc
accggctggatgcacaatcgggtgcggatggtggtcgccagctttctcaccaagaacctg
ctgaccccttggcaggaaggcgccgcctggttctgggacaccctggtcgatgccagcctc
gccaacaacaccctcggctggcagtggtcggccggctgtggcgccgacgccgcgccctac
ttccgcattttcaatccgctgctgcaaagcgagcgcttcgacgccgacggcgcctatctc
gatgcctgggtgccggagctgcggtcgctgtccggcaagcacaagcacatgccgtggacc
gcgccggtgccgccgaagggctatcctgcccccatcgtcgacctcgccgccacgcgcgac
cgcgcccttgccgcctacgaccgcatcaagtga
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