Flagellatimonas centrodinii: JN531_003285
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Entry
JN531_003285 CDS
T07957
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fce
Flagellatimonas centrodinii
Pathway
fce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JN531_003285 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fce03021
]
JN531_003285 (rpoA)
03400 DNA repair and recombination proteins [BR:
fce03400
]
JN531_003285 (rpoA)
Enzymes [BR:
fce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JN531_003285 (rpoA)
Transcription machinery [BR:
fce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JN531_003285 (rpoA)
DNA repair and recombination proteins [BR:
fce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JN531_003285 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
ULQ47316
LinkDB
All DBs
Position
complement(698486..699466)
Genome browser
AA seq
326 aa
AA seq
DB search
MQNVVADLLKPRLVDVETVSPYRARVTLEPMERGFGHTLGNALRRILLSSIPGAAVTEVQ
IEGVVHEYSALEGVQEDVLDILLNIKNVAVRLHNREEVSLRIEKSGKGPVTAGDIKVDHD
VEIVNPELVLAHLTGGKLNATLKITRGRGYVPATSLEREEETRGVGVLKLDASYSPVRRV
SYGVERARVAQRTDLDKLVLDVDTNGSVEPGEAVRLAARILRDQLAVFVDLEAEAATQTS
TATKTDLAPILFRPIDDLELTVRSANCLKAENLYYIGDLVQRTEIELMKTPNLGKKSLNE
IKEALRAQELELGMKLDNWSSPKTVA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgtcgtcgctgatctattgaaaccgcgcctggtcgatgtcgagaccgtgagc
ccttatcgggcccgcgtcacgctcgaaccgatggagcgtggcttcggccacaccctcggt
aacgccctgcggcggatcctgctgtcctcgatccccggcgcggccgtgaccgaagtgcag
atcgaaggtgtggtccacgagtacagcgcgctggaaggcgtgcaggaagacgtgctcgac
atcctgctcaacatcaagaacgtggcggttcgcctgcacaaccgtgaggaagtgtcgctg
cggatcgagaagtcgggcaagggcccggtgacggccggcgacatcaaggtcgaccacgac
gtcgagatcgtcaacccggaactggtgctggcccatctcaccggtggcaagctcaacgcc
acgctgaagatcacccgtggtcgcggctacgtgccggcgaccagcctcgagcgtgaggaa
gagacccgtggcgttggcgtactcaagctggacgcgtcctacagcccggtccgccgcgtc
agctacggcgttgagcgtgcccgcgtcgcccagcgcaccgacctcgacaagctggtgctg
gatgtcgacaccaacgggagcgtcgagccgggtgaagcggtgcggttggctgcacgcatc
ctgcgcgaccagctggcggtgtttgtcgaccttgaagccgaggccgcaacgcagaccagc
accgctaccaagacggatctcgcccccatcctgttccgcccgatcgacgatctggaactg
acggtgcggtcggcaaactgtctcaaggccgagaacctgtactacatcggcgacctggtg
cagcgcaccgagatcgaactgatgaagacgccgaacctcggcaagaagtcgctcaacgaa
atcaaggaagcgctgcgcgcccaggaactcgagcttggaatgaagctcgacaactggtcg
tcgcccaagaccgttgcctaa
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integrated database retrieval system
