Flagellatimonas centrodinii: JN531_007745
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Entry
JN531_007745 CDS
T07957
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
fce
Flagellatimonas centrodinii
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fce01011
]
JN531_007745
Enzymes [BR:
fce01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JN531_007745
Peptidoglycan biosynthesis and degradation proteins [BR:
fce01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JN531_007745
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM1_NFP_LYK
SLT_2
LysM3_LYK4_5
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
ULQ48178
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All DBs
Position
complement(1658839..1660449)
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AA seq
536 aa
AA seq
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MGRGSGAAENSVALRPVGSLVSPLTETSPLRKEPMTMHRWRRYFCTGVTFGLLTITSPSI
AQDDFPRYPSLEPAVAFWTDVFGRYAVHDSIIHPAAFPQVVLEVLHFSEGVPVQVRRARE
EAAKKRLRESLLRLSRFDGAPDALKPSDRALYDRFNGISSADRFRIAADSLRAQRGIKER
TRAALTTAGQYLPAMETTFSRYSLPLKLTRLPLLESSFDVSAYSKVGAAGLWQFMPASAR
IYMRLDEVVDDRRDPWTSTDGAARHLRDDYALLGNWPLALTAYNHGRNGIARGLERVGGS
TLIDLIERYDNRRFGFASKNFYAEFLAVTDIERNREQFFPGLEVATPVRFDEVQVDAFVP
FSALATASGTDEATLRRLNPAYSEAVYRGKLWVPNGHRIRIPSGQSERFHARYVSLPAAH
RADRQREYYRHHRIRKGEALGTIARRYGVDLRTLQSVNGIADASRIRAGQTLKIPPRDSV
SASLRKVQLRVHTVRSGQTLSAIARRYDVSVRELARHNRLDDKHLIRPGQRLKIPG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ttggggcgcggcagtggtgctgccgagaattccgttgcgctgcggccggtgggttcctta
gtatcgccgcttacggaaacgtcccccctcaggaaggagcctatgacgatgcatcgctgg
agacgctacttttgcactggggtgaccttcgggctgttgacgatcacctctccgtcaata
gcccaggacgactttccccgctatccctccctggaaccggccgtcgccttctggactgac
gttttcggccgctacgccgttcacgacagcatcattcatcccgcggccttcccgcaggtg
gtgctcgaggttctgcacttttccgagggggtccccgtgcaggtgcgacgcgcccgcgag
gaggcggcgaaaaagcggctgcgcgagagcctgctcaggctatcgcgcttcgacggcgca
cccgacgccctgaagccttcagatcgagcgctttacgaccgcttcaatggcatctcgtcg
gctgatcgcttccgcatcgcggcagactcgctgcgtgcccaacgcgggatcaaggagcgc
acacgtgcggctctcacgaccgctggccagtacctccccgccatggagaccaccttttcc
cgatactcgctgccccttaaattgacccgattgccgctgctggaatcgagcttcgacgtc
agcgcgtattcaaaggtgggcgccgccgggctgtggcagttcatgccagcctccgcgagg
atctacatgcgtctcgacgaggttgtggatgaccgccgcgatccgtggacatccaccgac
ggcgccgcccgccaccttcgcgatgactatgccttgttgggcaattggcccctggcgctc
acggcctacaaccacggccgcaatgggatagcccgcggcctcgagcgggtcggcggctcg
acgctgatcgacctgatcgagcgctatgacaaccgccgcttcggcttcgcctcaaaaaac
ttttacgcggaatttctggcggtaaccgatattgaacgaaaccgggagcagttcttcccc
gggctggaggtcgccacacccgtgcgcttcgatgaagtccaggtcgatgcttttgttccg
ttttcggcactcgcaaccgccagtgggaccgacgaggccaccttgcgtcgcctcaacccg
gcgtacagcgaagcggtctatcggggaaaactgtgggtgcccaacggtcatcgcatccgc
atccccagcggacagtccgagcgctttcacgcacgctacgtctcgctgcccgctgcacac
cgtgccgatcgtcagcgggagtactatcgtcaccaccgtatccgcaaaggtgaggccctg
ggaacgatcgcacggcgatacggcgtcgatctccggacgctccagagcgtcaatggcatt
gccgatgccagccgcattcgcgctggccagaccctcaagattccaccgcgagacagcgtc
tcagcatcgttgcgcaaagtgcagcttcgggtgcacaccgtgcgctccggccagacgctg
tcggcgattgcgcgtcgctatgacgtttcggtgcgagaactggcgcgacacaaccgcctt
gatgacaaacatctgatccgtcccggccagcgactgaaaatcccaggctga
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