Flagellatimonas centrodinii: JN531_008450
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Entry
JN531_008450 CDS
T07957
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fce
Flagellatimonas centrodinii
Pathway
fce03030
DNA replication
fce03410
Base excision repair
fce03420
Nucleotide excision repair
fce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JN531_008450 (polA)
03410 Base excision repair
JN531_008450 (polA)
03420 Nucleotide excision repair
JN531_008450 (polA)
03440 Homologous recombination
JN531_008450 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fce03032
]
JN531_008450 (polA)
03400 DNA repair and recombination proteins [BR:
fce03400
]
JN531_008450 (polA)
Enzymes [BR:
fce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JN531_008450 (polA)
DNA replication proteins [BR:
fce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JN531_008450 (polA)
DNA repair and recombination proteins [BR:
fce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JN531_008450 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JN531_008450 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ULQ45157
LinkDB
All DBs
Position
complement(1798322..1801063)
Genome browser
AA seq
913 aa
AA seq
DB search
MSAQAPLILVDGSSWLFRAYHALPPLTNAHGEATGAVFGMYNMLKRLMKDYQPERLCVVF
DPPGKTFREDWYPDYKANRGETPDDLKQQFPRITELLKAMGLPVIAVPGVEADDVIGTLA
RQARGADLDVLIVTSDKDMAQLVDDHVHLLDTMKNRRMDPDGVVEKFGVRADQIIDYLAL
MGDSSDNIPGVHGVGPKTAAKWLGQYGTLDALIADADAIKGKAGENLRSALDHLPLSKRL
TTIVLDVELPVTLDSLRPGERDEPAMVTLFDRLGFKPERAAAAVKPVVPDGTAEAPPEPA
QAPPPKENAEPTRSICVTTAEQLDQLIAALEQAELICVDTETDALDAQQAGLVGLAFAVK
AGEGWYVPLAHDYMGAPQQLPMAEVLARVKPLLESPDRPKVGQHLKYDLNVLRRHGIEVQ
GVAHDTMLQSYVLDAAGHRHDMDTLARKYLDHTTTTFADIAGKGKAQLSFNQVALEQAAP
YSAEDADITLRLHQTLFPRLQAEPTLEAVYRELEMPLVPVLADMEYHGVGVDVPLLKRIS
TELAQRMETLEKDCFEAAGQPFNLGSPKQLGAILFDQLGLRVVSKTPKGEPSTAEDVLEV
LADEHPLPRLILDWRSVAKLRSTYTETLPQMVNPKTGRIHTSYHQAVAATGRLSSSDPNL
QNIPIRTAEGRRIRQAFVPAEGCSLLSIDYSQIELRLMAHFSGDDKLLGAFRNGQDIHRA
TAAEVFGVALDAVSSEQRRAAKAINFGLIYGISAFGLARNIGVGRNEAAEIIERFFARYP
GVKAFMDGTRERAREQGFVETLRGRRLYLPNINARNAAQRQYAERTAINAPLQGTAADLI
KAAMLDVHGFLQDEAPEVRMIMQVHDELVFEGPEAMLRELGPVLSARMCRSSVLTVPLVA
EPGLGANWDASHG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccaggcaccgctgatcctggtcgacggctcgtcctggctgttccgtgcctac
catgcactgccgccgctgaccaacgcccacggcgaggccacgggtgccgtgttcggcatg
tacaacatgctcaagcggctgatgaaggactatcagccggaacgcctctgcgtggtattc
gacccgcccggcaagacctttcgtgaggactggtaccccgactacaaggccaaccgcggc
gagaccccggacgacctcaaacagcagttcccgcgcatcaccgagctgctcaaggcgatg
ggcctgccggtgatcgcggtccccggtgtcgaggccgatgatgtcatcggcaccctcgcg
cgacaggcgcgcggcgccgatctggacgtgctgatcgtcacctccgacaaggacatggcg
cagctggtggacgaccacgtgcatctgctcgacaccatgaagaaccgccgcatggacccg
gacggcgtggtcgagaagttcggtgtgcgtgccgatcagatcatcgactacctcgccctg
atgggcgacagcagcgacaacattcccggcgtgcacggtgtcggccccaagacggccgcc
aaatggctgggccagtacggcacgctggatgccctgatcgccgatgccgacgccatcaag
ggcaaggccggcgaaaacctgcggtcggcgctggaccacctgccgctgtcgaagcggctg
accaccatcgtgctcgatgtggaactgccggtgaccctggacagcctgcgccccggcgaa
cgtgacgagcccgccatggtcacgctgttcgaccgcctcggcttcaagccggaacgtgcc
gccgctgcggtcaaaccggtggtgccggatgggacggccgaggcgccgccggaacccgcc
caagcgccgccgccaaaggagaacgccgaacctacccgcagcatctgcgtcaccaccgcg
gagcagctcgaccagctgatcgccgcactggaacaggccgaactgatctgtgtcgacacc
gaaaccgatgccctcgacgctcagcaggccgggctggtagggctggcctttgcggtgaag
gcgggcgaaggctggtacgtgccgctggcgcacgactacatgggcgcaccgcaacagctc
cccatggccgaggtgttggcgcgggtgaaaccgctgctggagagcccggaccggcccaag
gtcggccagcacctcaaatacgacctcaatgtgctgcgccggcatggcatcgaggtgcag
ggggtcgcgcacgacaccatgctgcaaagctacgtgctcgacgccgccgggcaccggcac
gacatggataccctggcgcgcaagtacctcgaccacaccaccaccacctttgccgacatc
gcgggcaagggcaaggcgcagttgagcttcaaccaggtggcactggagcaggcggcaccc
tactccgccgaagacgccgacatcaccctgcggctccatcagacgctgttcccgcggctg
caggccgagcccacgctggaggcggtctatcgtgagctggaaatgccgctggtgccggta
ctggccgacatggagtaccacggtgtgggcgtcgacgtgcccttgctcaagcgcatcagt
accgagctggcgcagcgcatggaaaccctggagaaggactgcttcgaagcggccggccaa
cccttcaacctcggctcgccgaaacagctcggcgccatcctgttcgaccagctcggcctg
cgggtggtgagcaagaccccgaagggtgagccctccaccgccgaggacgtactggaagtg
ctggccgacgagcacccgctgccgcggctgatcctcgactggcgcagcgtcgccaagctg
cggtcgacctataccgagaccctgccgcagatggtgaacccgaagaccgggcgcatccat
accagctatcaccaggcggtcgcggccaccggccggctgtcctcgtccgaccccaacctg
cagaacatcccgatccgtactgccgagggccggcgcatccgccaggccttcgtgcccgcc
gagggctgcagtctgctgtcaatcgactattcacagatcgaactgcgactgatggcgcac
ttctccggcgacgacaaactgctgggggctttccgcaatggccaggacatccaccgcgcc
actgccgccgaggtgttcggggtggcgctcgatgccgtcagcagcgaacaacgtcgtgcc
gccaaggcgatcaacttcgggctgatctacggcatctccgccttcggcctggctcgcaac
atcggcgtcggccgcaatgaggcggccgaaatcatcgaacgtttctttgcccgctacccg
ggggtcaaggccttcatggacggcacccgtgagcgggcgcgcgaacaaggctttgtcgaa
accctgcgcggtcgccggttgtacctacccaacatcaacgcccgcaacgcggcacagcgt
cagtatgccgagcgcaccgccatcaacgcgccgctgcagggcacggctgccgatctcatc
aaggccgccatgcttgacgtccatgggttcctgcaagatgaagcgcccgaggtgcggatg
atcatgcaggtacacgacgaactggtgttcgaaggccccgaggccatgctccgcgagctc
gggccggttctgtcggcacgcatgtgccgttcatccgtgctgacggtaccgttggtcgcc
gaaccgggcctcggagccaactgggacgcttcccacggatag
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