Flagellatimonas centrodinii: JN531_012380
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Entry
JN531_012380 CDS
T07957
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fce
Flagellatimonas centrodinii
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fce03016
]
JN531_012380 (truB)
Enzymes [BR:
fce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JN531_012380 (truB)
Transfer RNA biogenesis [BR:
fce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JN531_012380 (truB)
Prokaryotic type
JN531_012380 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Sas-6_helical
Motif
Other DBs
NCBI-ProteinID:
ULQ45897
LinkDB
All DBs
Position
2592120..2593040
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AA seq
306 aa
AA seq
DB search
MSAPRRPRRVISGILPLDKPKGLSSNTALIEVRRRFQADKAGHVGSLDPMATGMLPVCLG
QATKLCGYLLESDKRYLATVRLGVATDTGDAEGEPIAHSDLSGFNVAALEAVLRQFVGPQ
QQVPPMYSALKQGGVRLYQLAREGQVVERPARSIMVHALQLQSTRTDGFVVDVRCSKGTY
IRVLAEDIARAMGEVAHLVGLRRLQAGPFVGDMVTLEQLDATYDGGGLAALDRLLQPLAS
ALPDWPKIAVDSAAAVLLRRGLQVPVDAQMADTLVAVVDAEARALCLADLTDGKLQPRRW
LADDAT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccccgcgccggccgcgccgggtcatcagcggcatcctgccgctggacaagccc
aagggcctgtcatcaaacaccgcattgatcgaggtgaggcgtcgattccaggccgacaag
gccggccacgtcggcagcctcgatccgatggccaccggcatgctcccggtgtgcctgggg
caggccaccaagctgtgcggatacctgctggaatccgacaagcgttacttggccacggtg
cgcctgggcgttgccaccgacaccggagatgccgagggcgaaccgattgcgcacagcgac
ctctccggcttcaacgtcgccgccttggaagccgtgcttcggcagtttgtcggaccccag
cagcaggtgcctcccatgtactcggcactgaagcagggcggagtgcgcctgtatcagctg
gcccgcgaagggcaggtggtggagcgcccagcgcggtcgatcatggtccacgcgctgcag
ctccagtcgacccgcacggatggctttgtcgttgacgttcgctgctccaagggcacttat
attcgtgtcctggccgaagacattgctcgagcgatgggcgaggtggcccatctagttggc
ttgcgacggctgcaggcgggacccttcgtcggggacatggtgacattggaacagcttgac
gccacctacgacggcggcggcttggcggcgctggatcgattgctgcagccgctggcatca
gccctgccggactggccgaaaatcgccgtcgattccgctgctgcggtcttgctgcggcga
gggctgcaggtgcccgtggatgcacagatggcagacaccttggtcgcggtggtcgacgcc
gaggcgcgagcgctgtgcctcgctgacctgaccgacggcaagctacagccccggcgctgg
cttgccgatgacgcgacatga
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