Flagellatimonas centrodinii: JN531_012390
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Entry
JN531_012390 CDS
T07957
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fce
Flagellatimonas centrodinii
Pathway
fce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JN531_012390 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fce03019
]
JN531_012390 (pnp)
03016 Transfer RNA biogenesis [BR:
fce03016
]
JN531_012390 (pnp)
Enzymes [BR:
fce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JN531_012390 (pnp)
Messenger RNA biogenesis [BR:
fce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JN531_012390 (pnp)
Transfer RNA biogenesis [BR:
fce03016
]
Prokaryotic type
tRNA degradation factors
JN531_012390 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
aRib
PE
Motif
Other DBs
NCBI-ProteinID:
ULQ45899
LinkDB
All DBs
Position
2593537..2595633
Genome browser
AA seq
698 aa
AA seq
DB search
MAIPATPAAAVTKTFQYGNQTVTLETGAIARQAASVIVRMGETVVMVNCVAKKDAKPDQS
FFPLTVDYMERFYAGGRIPGGFFKREGRPTEKETLTSRLIDRPLRPLFPDGFLNEVQIAA
TVMSLDPEINGDIPAMIGASAAVALTGAPFMGPIGAARVGYKDGHFLLNPPESELKTSEL
DLVVAGTRDAVLMVESEAKMLPEAVMLGAVLFGHEQMQVAIQAINELVAAAGQPKWDWQA
ASQDAVSAYVAEYATAVAEAYTHTDKQARYGKLGEVRTAAIAGKPDALSDQQVKDGLHEL
EAGVVRGRILDGQPRIDGRDRFTVRPLAISAGVLPRTHGSALFTRGETQVMAVVTLGSGK
DYQIIDAIEGEWHDKFMFHYNFPPYCVGETGRMNMPKRREIGHGRLAKRGVAAVMPDLEK
EFPYVVRVVSEVTESNGSSSMASVCGACLSLMDAGVPLKAPVAGVAMGLILEGDRWAVLT
DILGDEDHLGDMDFKVAGTQNGVTALQMDIKIAGITGEIMQQALEQAKSARLSILEQMNE
VLASPRAEMSPYAPRITTIKIHPDKIREVIGKGGATIQSITRDTGTQIDIDDDGTIKVAA
TDGQAAQAAIARIEALTRDVEVGAIYEGKVAKIMDFGAFVTIAPGKDGLVHISQLADKRV
EKVDDVVQEGQAVRVKVLEVSRDGKIRLSMKSVDVADA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcccgccaccccggctgcggccgttaccaagaccttccagtacggcaaccag
accgtcacgcttgaaaccggtgccattgcccggcaggccgccagcgtcatcgttcgcatg
ggcgaaaccgttgtgatggtgaactgtgtcgccaagaaggacgccaagccggaccagtcc
ttctttccgctgaccgttgactacatggagcggttctatgcgggtggccgcatccccggc
ggcttcttcaagcgcgagggccgcccgaccgagaaggagacgctgacatcgcgcctcatc
gaccgtcccttgcgcccactgtttccggacgggttcctcaacgaagtgcagattgctgcc
accgtgatgtcgctcgaccccgagatcaacggcgacattccggccatgatcggggcgtct
gctgcggtggcgcttaccggggcccccttcatggggccgatcggtgctgcgcgggtgggc
tacaaggatggtcactttctgctcaacccgcccgaaagtgaactcaagacctcggaactg
gacctggtcgtcgctggcacccgtgatgcggtgctgatggtcgagtcggaagcgaagatg
ctgccggaggcggtcatgttgggggccgtcctgttcggccacgagcagatgcaggtggcg
attcaggccatcaatgagttggtcgccgcggcgggtcagccgaagtgggattggcaggcc
gccagccaggacgcggtatcggcctatgttgccgagtacgccactgcggtggccgaggca
tacacgcacaccgacaagcaggcgcgctacggcaagctgggcgaagtgcgcaccgcagcc
atcgccggcaagcccgatgccctaagtgaccagcaggtcaaggacggtctccacgagctc
gaagccggtgtggtccgtggtcgtattctcgacggtcagccgcgtatcgacggccgagac
cgtttcaccgtgcggccgctcgccattagcgctggtgtactgccccggacgcacgggtcg
gccctgttcacgcgcggtgagacccaggtaatggcggttgtgacgctgggatcgggcaag
gactaccagatcatcgacgcgatcgagggcgagtggcatgacaagttcatgttccactac
aacttccccccgtactgcgtcggtgaaacgggtcgcatgaacatgcccaagcggcgtgaa
atcggccacggccgcctcgccaagcgcggcgttgccgcggtgatgccggacttggaaaag
gaatttccgtacgtggtgcgggtggtgtccgaagtcaccgagtccaatggctcgtcatcg
atggcctcggtgtgtggtgcctgtctgtcgctgatggatgccggcgttccgctgaaggcg
cctgtggccggtgtggccatgggactgattctcgaaggggaccggtgggcggtgttgacc
gacatcctcggcgacgaagatcacctgggcgacatggacttcaaggtggcgggtacgcag
aacggcgttaccgccctgcagatggacatcaagatcgccggtatcaccggcgagatcatg
cagcaggcgctcgagcaggcgaagtcggcccggctcagcatcctcgagcagatgaatgaa
gtgttggcgtcaccgcgggccgaaatgtccccgtacgcgccgcgcattaccaccatcaag
atccatcccgacaagattcgtgaagtcatcggtaagggcggtgcgaccatccagagcatc
acccgcgataccggcacccagatcgacatcgatgacgacggcacgatcaaggtggcagcg
accgatggtcaggccgcgcaagctgccatcgcccggatcgaggcgctgacacgcgatgtc
gaagtgggggcgatctacgaaggcaaggtcgccaagatcatggatttcggcgcgttcgtc
accatcgcgccgggcaaagatggtctggtccacatctcgcagctcgccgacaagcgggtc
gagaaagtggacgatgtggtgcaggaagggcaggcggtgcgcgtcaaggtgctggaagtc
agccgcgacggcaagattcgcttgtcgatgaagtcggtcgacgtggcagacgcttga
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