Flagellatimonas centrodinii: JN531_012950
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Entry
JN531_012950 CDS
T07957
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
fce
Flagellatimonas centrodinii
Pathway
fce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JN531_012950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fce03000
]
JN531_012950
03400 DNA repair and recombination proteins [BR:
fce03400
]
JN531_012950
Enzymes [BR:
fce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JN531_012950
Transcription factors [BR:
fce03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JN531_012950
DNA repair and recombination proteins [BR:
fce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JN531_012950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ULQ46005
LinkDB
All DBs
Position
complement(2688336..2689832)
Genome browser
AA seq
498 aa
AA seq
DB search
MSNLAVIPTPQVCEQARLSRDSRFDGLFFTAVTSTGIYCRPVCPAPPPKPQNVRYYANAA
AAEAAGFRPCLRCRPELSPADGTWRRGDDVVARALTLIDQGLLAEQPLSVLAERVQVGER
QLRRLFVDRLGAPPIGVHGTRRLLFAKQLLTETALPITEIALAAGFRSLRRFNTTFREAY
RMAPRDLRTRSPATDGGALTLRLGYRPPYDFNAMLDFLRGRALPGVEVVDTRSYARAFGP
AEAPGWLRVSAWPGTREHALKLELHSARPALLLDTVNRLRRMFDLDADPEAIARTLQVDP
RLRPLLKRRPGLRIPSGWDGFEIAVRAVVGQQVSVAAARTLTTRLAQRFGTALPEALAAR
GFTQLFPTPEALADADLTGIGLTRSRAATVQAIARALLDGQVDFSPDSPLDRFVARWVAL
PGIGPWTAQYIALRALGHPDAFPAEDLVLQKTLPTDGSRLSARTLRSHADAWRPWRGYAV
MHLWRHAAERPPNTGDTP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacctcgccgtcatccccacgccccaggtctgtgaacaggcccggctgagtcgt
gactcgcggttcgacggattgttcttcaccgccgtgaccagtaccggcatctactgtcgg
ccggtctgtccggcgccgccgccaaaaccgcagaacgttcgctactacgccaatgctgct
gccgcagaagccgcgggctttcgtccctgcctgcgctgccggcccgagctgtcgcctgcc
gacggcacctggcgacgcggggacgacgtggtggcgcgcgcactcaccctcatcgaccag
ggcctgctggccgagcaacccctgtcggtactggccgagcgcgtacaggtgggcgagcgg
cagctacggcgcctgttcgtcgaccgtctgggcgcgccacccatcggcgtgcatggcact
cgccgcctgctgttcgccaagcaactgctcaccgaaaccgcgctgccgatcaccgagatc
gccctggccgccggctttcgcagcctgcgccgattcaacaccacctttcgcgaggcctac
cgcatggccccgcgtgacctgcgcacgcgcagccctgctacggacggcggcgcgctgacg
ctgcgcctgggctatcgcccaccctacgacttcaacgccatgctcgatttcctgcgcggc
cgcgcgctgccaggggtggaagtggtggatacgcgcagctacgcccgcgccttcggtccg
gcagaggccccgggctggctgcgggtgagtgcctggcccggcacccgcgaacacgcactg
aagctggagctgcacagtgcccgtccggccctgttgctggacaccgtcaaccgcctgcgg
cgcatgttcgatcttgatgccgacccggaagccatcgcccgcacccttcaggtcgacccg
cgcctgcgcccgctgctgaaacgccgccccggactgcgcatccccagcggctgggacggc
ttcgagatcgccgtgcgcgccgtcgtcggccagcaggtgagtgtggccgccgcgcgcacc
ctcaccacgcggctggcgcagcgcttcggcacagcgctgccggaagccctcgcggcacgc
ggcttcactcagcttttccccacgcccgaagcgctggccgatgccgacctcaccggcatc
ggcctcacccgcagccgcgccgccaccgtgcaggccatcgcccgcgccctgctcgacggc
caggtggacttcagccccgacagcccactggatcgcttcgtcgcacgctgggtcgccctg
cccggcatcggcccctggaccgcgcagtacatcgcgctgcgcgcgcttggccaccctgat
gcctttcccgccgaagacctggtcctgcagaaaacccttcccaccgacggcagccgcctc
agcgccaggaccctgcgcagccatgccgacgcctggcggccctggcgcggttacgccgtc
atgcacctgtggcgccatgccgcagagcgcccgcccaacaccggagacaccccatga
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