Flagellatimonas centrodinii: JN531_013340
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Entry
JN531_013340 CDS
T07957
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
fce
Flagellatimonas centrodinii
Pathway
fce00071
Fatty acid degradation
fce00280
Valine, leucine and isoleucine degradation
fce00310
Lysine degradation
fce00362
Benzoate degradation
fce00380
Tryptophan metabolism
fce00410
beta-Alanine metabolism
fce00640
Propanoate metabolism
fce00650
Butanoate metabolism
fce00907
Pinene, camphor and geraniol degradation
fce00930
Caprolactam degradation
fce01100
Metabolic pathways
fce01110
Biosynthesis of secondary metabolites
fce01120
Microbial metabolism in diverse environments
fce01200
Carbon metabolism
fce01212
Fatty acid metabolism
Module
fce_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JN531_013340 (fadB)
00650 Butanoate metabolism
JN531_013340 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JN531_013340 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JN531_013340 (fadB)
00310 Lysine degradation
JN531_013340 (fadB)
00380 Tryptophan metabolism
JN531_013340 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JN531_013340 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JN531_013340 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JN531_013340 (fadB)
00930 Caprolactam degradation
JN531_013340 (fadB)
Enzymes [BR:
fce01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JN531_013340 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JN531_013340 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JN531_013340 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JN531_013340 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ULQ46079
LinkDB
All DBs
Position
2768619..2770769
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AA seq
716 aa
AA seq
DB search
MYEGKSIRVTKHDGGIAELCFDRKDESVNKFDQQTLGELRDVAAALAADSNLKGLVVTSA
KSVFIVGADIMEFGANFQRPEDEIAAWGLKANEIFNAIEDLPFPTVSAVNGIALGGGFEM
ALSTDYRVMSETAMVGLPETKLGIIPGFGGTVRLPRLIGADNAIEWIAGASQNKPAAALA
VGAVDAVVKPEKLFDAAVSLVNQANAGQYDWKARRAQKTGPLKLDMIEQMMVFSTSEAFI
AGKAGKNYPAPVAAVKAIQKAAGKGRDDALKIEAAAFAKLAKTTVADALIGLFLNDQFLK
KTAKAQMKGAIEIKQAAVLGAGIMGGGIAYQSAVKGTPIIMKDIADAALDLGMGEANKLL
SKQVARKKLTPEKAGAILSTIRPTLNYGDFGNVDIVIEAVVENPKIKKSVLAETESLVKP
GTIIASNTSSISIQELSTAMKHPENFLGMHFFNPVHRMPLVEVIYADKTSKEAIAATVSL
ATKMGKTPIVVKNCPGFLVNRILFPYFGGWLALIRDGADFVAVDKIMEKFGWPMGPAYLQ
DVVGIDTSHHVGDVLAEGYPDRMGKTFETALDVMYEAKRYGQKNGIGFFKYSTDPKGKPK
KEVAPDTYELIGKVQPNGKQDISEEDVIDRLMLPMIIETVRCLDEGIVGSPQEADMGLIL
GIGFPPFRGGALKYADTLGMKTVLEKAAKFAHLGKLYEPTESMKKMAADGTTYYTK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaggaaaatccatccgtgtgacgaagcacgacggcggcatcgccgaactgtgc
ttcgaccgcaaggacgagtccgtcaacaagttcgaccagcagacgctgggcgagctacgt
gacgtcgcggcggccctcgccgcagacagcaacctgaaggggctggtggtgacgtcggcc
aagagcgtcttcatcgtcggcgccgacatcatggagttcggtgccaacttccagcgcccg
gaggacgagattgccgcctgggggctgaaggccaacgaaatcttcaatgccatcgaggat
ctgccgttcccgaccgtgagcgcggtcaacggcattgcccttggcggcggcttcgagatg
gcgctgtccactgattaccgggtgatgagcgaaaccgccatggtcggtctgccggaaacc
aagctgggcatcatccccggctttggcggcaccgtgcgtctgccgcggctgattggtgcc
gacaacgccatcgaatggatcgccggtgccagccagaacaagcccgcagcggcgctggcg
gtcggcgccgtcgatgccgtggtgaagcccgagaagctgtttgacgccgctgtcagcctg
gtcaatcaggccaatgcaggccagtacgactggaaggcgcgccgcgcccagaagactggc
ccgctgaagctcgacatgatcgagcagatgatggtgttttccacctcggaagcctttatc
gccggcaaggccggcaagaactatccggccccggttgcggccgtcaaggcgatccagaaa
gcggccggcaagggccgtgacgatgcactgaagatcgaggccgcggcctttgccaagctg
gccaagaccacggtggccgacgccctgatcgggctgttcctcaacgaccagttcctcaag
aagacggccaaggcgcagatgaagggcgccatcgagatcaagcaggcggcagtgctgggc
gccggcatcatgggcggtggcatcgcctaccagagcgcggtcaaaggcacgccgatcatc
atgaaggacatcgccgatgcggcgctggacctgggcatgggcgaggccaacaagctgttg
tcgaagcaggtggcacgcaagaagctgacgcccgagaaggccggcgcgatcctgtcgacc
atccgtccgacgctgaactatggtgattttggcaacgtcgacatcgtcatcgaagcggtg
gtcgagaaccccaagatcaagaaatcggtgctggccgagaccgaaagcctggtcaagccc
ggcaccatcatcgcctccaacacctcctcgatttcgatccaggagctgtccaccgcgatg
aaacaccccgaaaacttcctcggcatgcacttcttcaacccggtgcaccggatgccgctg
gtagaggtgatctacgccgacaagacgtcgaaggaggccatcgccgccaccgtgtcgctg
gccaccaagatgggcaagacaccgatcgtggtgaagaactgcccgggcttcctggtcaac
cgcatcctgttcccgtacttcggtggctggctggcactgatccgcgacggtgccgatttc
gtcgccgtcgacaagatcatggaaaagttcggctggccgatgggcccggcctatctgcag
gacgtggtcggcatcgacacctctcaccatgtcggtgacgtgcttgccgaaggctacccg
gaccgcatgggcaagaccttcgagaccgcgctggatgtgatgtacgaggccaagcgctat
ggccagaagaacggcatcggcttcttcaagtattcgaccgaccccaagggcaagccgaag
aaggaagtggcgccggatacctatgagctgatcggcaaagtgcagcccaacggcaagcag
gacatcagcgaggaggacgtgatcgaccgcctgatgctgccgatgatcatcgaaaccgtg
cgctgtcttgacgagggtattgtcggctcgccgcaggaagccgacatgggtctgatcctc
ggcatcggcttcccgccgttccgcggtggcgcactcaagtacgccgacaccctgggcatg
aagaccgtgcttgaaaaagccgccaagttcgcgcatctcggcaagctctatgagcccacc
gagtcgatgaagaaaatggccgccgacggcacgacttactacaccaagtaa
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