Flagellatimonas centrodinii: JN531_016730
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Entry
JN531_016730 CDS
T07957
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fce
Flagellatimonas centrodinii
Pathway
fce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JN531_016730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fce03400
]
JN531_016730
Enzymes [BR:
fce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JN531_016730
DNA repair and recombination proteins [BR:
fce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JN531_016730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
UvrD-helicase
UvrD_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ULQ48423
LinkDB
All DBs
Position
unnamed:31988..33940
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AA seq
650 aa
AA seq
DB search
MKAKLIRRDLPVRIDGIERFLSGGHFKGVGPGRAKALVQAFGERTLTVIADDPARVAEVH
GFSRELALKMRELLHPMRVRAPAMASLQEVVGPGTADGLISQFGGSAATIVHENPYRLCS
EAKGFGFLRADEIARKSGMPADSPHRLAAGIGYLIDQAEGQGHAGLPDDYLYWRLAKITG
VPASRARRISPVAELDGLVITATPSGCMVQKRHIHETEQAIADLLVAMANAPATAPPTSQ
VDGAIGRAERARRTVLDDRQRAAVRQAVTSMVSIVTGGPGTGKSATLGVLVGVLGRAQVA
QAAPTGKAARRMQEATGHRAGTLHALLAFNPNTKRFGRNEDLPIDAPVVAVDEVSMLDIH
LLLALLKALRPGQRLVLMGDPDQLPSIGVGNVLQDLIDCEVIPVTRLETVYRQGAGSAIL
ANARRVIRGEMPDLEAGSQEFRFLEADNEEAALRLVMDQVSRVLPRHGMDLRRDIQMLTA
MNKGMVGVEGLNREIQRLLPESPGVDLQEERACVGDRVLQTRTNHDLGLYNGDLGLVTEA
NAESKVLKVRFDGRTVTYGPERNQLRLAWAMTTHRVQGSEFSAVPMVFSQRMSMMLDRGL
LYTAMTRARYELVIIAPKSLIRQAVSKKRVRHSGLVHKIREVAGAGNVAV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcaaagctgattcggcgggatttaccggttcggattgacggtatcgagcgattc
ctcagcggagggcacttcaagggggtgggacctggacgcgcaaaggcgctggttcaggcc
ttcggggagcgtacgctgacagtaatcgccgatgatccggcccgcgtcgctgaagttcat
ggtttctcgcgcgagcttgcgctgaagatgcgggaacttctgcaccccatgagggtgagg
gccccggcaatggcttcgcttcaggaggtggtgggccccggaaccgcagatggcctaata
agtcagttcggcggtagcgccgcaacgatcgttcatgaaaatccatatcggctgtgctct
gaggcgaagggtttcggattcctccgagcggatgaaatcgcccggaagtctggcatgccg
gcggacagtccccaccgattggctgccggcattgggtatctcatcgatcaggcggaaggc
cagggccatgccggcttgccggacgactatctgtattggcgactcgcgaagatcacgggg
gtacccgcgtcccgagcgcgacgtatctcgcccgttgccgaactcgatggtttggtcatc
actgccaccccgagcggctgtatggtccagaaacggcacattcacgagaccgagcaggcg
atcgccgatctgctggtggctatggccaacgcgccggcaacggcgcccccgacgtcgcag
gtcgacggggcaattggaagggcagagcgggcgcggagaacggtcttggatgatcgccaa
cgggcagcagttcgacaagccgtgacgtcaatggtgagcatcgtcaccggaggaccgggt
accggcaagtcagcgaccctgggtgtgctggtaggtgtcctcgggcgcgctcaagtcgcc
caagcggcgccaaccgggaaggcggcgagaaggatgcaggaggccaccggacatcgggcc
ggcacgttgcacgcattactggccttcaaccccaacacgaagcgttttggcaggaatgaa
gacctgccgatagatgcgcctgtggtggcggtggatgaggtgagcatgctcgacatccat
ctgctgctcgccttgttgaaagccctccgacctggccaacgactcgttttgatgggcgat
cccgaccaactacctagtattggagttggcaacgtcctgcaggacctgatcgactgtgaa
gtgattccggtcacacgcttggaaacggtctacaggcagggcgccggcagtgcgattctg
gccaatgccagacgggtgattcggggtgaaatgccggatctggaggccggtagccaggag
ttccgcttcctggaggccgacaacgaggaagctgcacttcgtcttgtgatggatcaggtg
tcgcgggttctgccgcgacacgggatggaccttcggcgggacattcagatgctcaccgcc
atgaacaagggcatggttggtgtcgaggggttgaacagggagattcagagactgttacct
gagtctcccggggtcgacctacaggaggagcgcgcttgtgtgggtgatcgggtgctgcag
acgcgaacaaatcacgacctgggcctttacaacggtgacctgggtctggtgactgaagcc
aacgcagaaagcaaagtcctgaaagtccgcttcgatgggcgaacggtgacctatggcccc
gagcggaaccagctccgactggcatgggcgatgaccacacacagagttcagggcagcgag
ttcagcgcggtacccatggtgttctcgcagcgaatgtccatgatgttggacaggggcctg
ctctacacggcaatgacccgcgcccggtacgagctcgtaatcattgcgcccaaaagcctg
atacgtcaggccgtttccaagaagcgggttcgacacagcggtctggtccacaagatccga
gaagtggccggcgcggggaatgtcgctgtctag
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