Francisella cf. novicida Fx1: FNFX1_0364
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Entry
FNFX1_0364 CDS
T01937
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fcf
Francisella cf. novicida Fx1
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcf03009
]
FNFX1_0364
Enzymes [BR:
fcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FNFX1_0364
Ribosome biogenesis [BR:
fcf03009
]
Prokaryotic type
ribosomal protein modification factors
FNFX1_0364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CDKN3
YajR_YAM
DeaD_dimer
DUF7823
Motif
Other DBs
NCBI-ProteinID:
AEB27312
LinkDB
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Position
343268..344575
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AA seq
435 aa
AA seq
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MIKIPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYDNADMVIVNTCGFLNSAIDES
LDVIGEAIAENGKVLVTGCLGNKADLIKEKHPEVLSITGPQDYENLIEAVHTHAPIFAND
FVSLVPPQGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMKEAEKLKKA
GVKELLVISQDTSAYGVDIKYKSNKEYQSNIIDLATALGDLDMWTRLHYVYPYPHVDKIV
PLMAQGKILPYLDVPLQHSSPEVLKRMKRPAHTQKTLDRINKWRDICPDITIRSTFIVGF
PGETEADFEHLLDFAEKAQLDRVGCFKYSEVEGAKANQFDNLISEEIKQQRLDEFMGLQA
QISADKLQRFVGTEQQVIIDVINKDENYAIGRTKYDAPEVDGQVIIGDALERNLKVGEFA
TVEITESTEYDLIAD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatccctaaaattggttttgtcagcttgggttgtccgaaaaaccttgttgat
tctgagcgtatcataactaagctaaaagctgagggttatgacctggttgatagctatgat
aacgctgatatggttattgttaatacttgtggatttctaaactctgctattgatgagtct
ctagatgttattggcgaagctatcgcggaaaatggtaaggtgttagttactggatgtctt
gggaataaagctgatcttattaaagaaaaacatccagaggttttaagtattacaggacct
caagattatgaaaatctaattgaagctgtgcatacccatgcgccaatttttgctaatgat
tttgtatctttagtaccgccacaaggtattaagcttacaccgagacattattcatatctg
aaaatatcagaagggtgtaataatacttgtactttttgtattatcccggatatacgtggc
aaattaaaaagtcgttctatagacaatatcatgaaagaagctgaaaagcttaaaaaagca
ggcgttaaagagctattagtaatatctcaagatacttctgcgtatggcgttgatattaag
tacaaatcaaataaagaatatcaaagcaacattattgatcttgctactgctcttggcgat
ttagatatgtggacgagactacactacgtttacccttatcctcatgttgataaaattgta
ccacttatggctcaaggaaagatacttccttacctagacgtacctttacaacattcatct
ccagaagttctaaagagaatgaaacgcccagctcatacacaaaaaactcttgatagaatc
aataagtggcgtgatatatgtccggatataactattcgtagtacatttatagtaggtttc
cctggtgagacagaggctgattttgagcatttgctagactttgctgaaaaagctcagctt
gatagagtcggttgctttaagtattctgaagtagagggtgcaaaggctaaccagtttgat
aatctgatttctgaagagatcaaacaacagcgtttagatgaatttatggggttacaagca
caaataagcgctgataaattacaacgatttgttggaacagaacagcaagtaatcatagat
gtcataaataaagatgaaaactatgctataggacggactaaatatgatgctccagaggta
gatggtcaagtaattatcggtgatgcgctagaaagaaatctaaaagttggtgaatttgca
actgtcgagattacagaatcgactgaatatgatctgatagctgattag
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