Francisella cf. novicida Fx1: FNFX1_0367
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Entry
FNFX1_0367 CDS
T01937
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fcf
Francisella cf. novicida Fx1
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_0367
Enzymes [BR:
fcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FNFX1_0367
DNA repair and recombination proteins [BR:
fcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FNFX1_0367
Prokaryotic type
FNFX1_0367
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
STAT_int
DUF3318
Motif
Other DBs
NCBI-ProteinID:
AEB27315
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Position
345635..347134
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AA seq
499 aa
AA seq
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MQIVWFKRDLRVTDNLALSLAAEKGDILPLYIIEPELWQQPDMSHRQYLFLSECLEELNT
ELTKLGQSLAIMLGDAVEIFEQLIQKYNIKNVWSHQETWNDWTYQRDIKLEKFFKQNNIV
WHQPYQNGVVRCLADRDNWALLWHQRMSEKIIRAPTKLKFICENQIKIPTAESLGLEYDN
CYKRQKGGRIRALRILDSFLYQRGCGYTKEMSSPVTAFKSCSRLSPYIAFGVISLKEIYQ
KANQRKNEIKESSVKNKTKWLSAMRSFLSRLRWHCHFMQKLEDQPSIEYENLHSAYDQLR
TEPLNQQCFEAWKTGNTGYPMIDACMRALIATGWLNFRMRAMLMSFASYHLWLDWRVTSL
YLARLFTDYEPGIHYLQVQMQSGTTGINSIRIYNPIKQSIDQDPNGEFIRRWLPELENVS
NENIHTPWLEKHNSLDYPDPIIDEKQARKFAADNIYKIRKSSKNSQETKNIVKKHASRKT
PRKIKSKQHKVESIQGELF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagtttggtttaagcgagacttacgcgtaactgataacttagctttatcatta
gccgctgaaaaaggagatattttaccactatacataattgaaccagagctttggcaacag
cctgatatgagccatagacaatatttgtttttatcagagtgtctagaagagctaaatact
gagcttacaaaattgggtcaatctttagctataatgctaggggatgctgtagagattttt
gagcagctaatacaaaaatataatataaagaatgtttggtcgcatcaagaaacttggaat
gactggacatatcagcgagatattaaacttgagaaattttttaaacagaataatattgta
tggcatcaaccatatcaaaatggtgtagttcgttgtttagctgatagagataactgggct
ttgttatggcatcagcgcatgagtgaaaagattataagagcgcctaccaaacttaagttt
atttgcgaaaaccaaatcaaaatacctactgctgagagccttggtctagagtatgataat
tgttacaaaagacaaaaaggtggtcgaattcgtgcacttagaattcttgatagtttttta
tatcaaaggggttgcggctataccaaagaaatgtcttcacctgtaacagcttttaaaagt
tgttcaaggttatcgccatatatagcttttggagttatttcgttaaaagagatataccag
aaagctaatcagcgtaaaaatgaaatcaaagaaagtagcgtaaaaaataaaacaaaatgg
ctaagtgcaatgcgttcatttttatcacgtttgcgttggcattgtcattttatgcagaag
ttagaggaccaaccaagtattgaatatgagaatttgcattcagcttatgatcaactacgt
acagaaccgctaaatcaacaatgttttgaagcatggaaaacaggcaatactggttatcca
atgatagatgcttgtatgcgagctttgattgcaacagggtggctaaattttcgtatgcgt
gcaatgcttatgagttttgcaagctatcatttgtggttagattggcgtgttacatcgcta
tatttagcaaggttatttactgattatgagccaggtattcattacttacaagtacaaatg
caatctgggactacaggtattaatagtatccgtatttataaccctattaagcaaagcatt
gaccaagatcctaatggcgagtttattcgaagatggctacctgaactagaaaatgtaagt
aatgaaaatattcatactccatggttagaaaaacataattctctagattatccagatcca
atcattgatgaaaaacaagcacgtaaatttgctgcagataatatttataaaattagaaaa
agctctaaaaatagccaagaaactaaaaatattgtcaaaaaacacgccagtagaaaaacg
cctagaaaaataaaatctaaacaacacaaggtagagagcatacaaggagaattattctaa
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