Francisella cf. novicida Fx1: FNFX1_0484
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Entry
FNFX1_0484 CDS
T01937
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf03030
DNA replication
fcf03430
Mismatch repair
fcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNFX1_0484
03430 Mismatch repair
FNFX1_0484
03440 Homologous recombination
FNFX1_0484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcf03032
]
FNFX1_0484
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_0484
Enzymes [BR:
fcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNFX1_0484
DNA replication proteins [BR:
fcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNFX1_0484
DNA repair and recombination proteins [BR:
fcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNFX1_0484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEB27432
LinkDB
All DBs
Position
464572..468051
Genome browser
AA seq
1159 aa
AA seq
DB search
MISHLRVHTGYSVVDSTVRLGDLFARAKDKNIVAVALTDVCNLFAAVKFYKQALASGIKP
IFGVELKVDTEFGICDLVLLAENNQGYQNIVKLVSKAYQEADRFGSIPLIPKSWLSEVKL
ESVICLNGGQQGELGKAILAKDYIKADEIINQNIEIFGTNNYIIEIHKLEYENEGLYNEK
ALEYASKYNLIAVATNLTVFMEADDYDIHEIRACINEKTTILDESRKSKFTKEQYLKSAD
EMYETFSALPVLVDNTLAIAKRCNVTFELGKPCLPTVDIPAGLTEKEYFSKLCYQGLDKR
LEKILENRSADKHEHIIKVYKDRVQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKESVAQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YEEMQADEDVAEIIEKAQKLEGLPRSLGKHAAGIVISPTKISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIINNTVKSINTKRPADQKPLDIADIPLDDQKTFKLLQA
GNTTGIFQLESQGMRQIVKDLGTSNFEEIIALVALYRPGPMENIPTFIDRKHGRKQITYL
HPLLEGVLKETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEKQRKIFKE
GAAKHHNIDTKLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDCKNMGITVLAPNVNKSVYDCIAVSKGTILLGLGAIKGLGGEAIKS
ILTERDIAGEFSSIFDLCRRVDLRKVNKKALEALCYAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMNAAGQDDLFGFTEQESDTDAELERECIVEEWNLKELLINEKKALGMYFSGHII
DEESHWRNHVSFSDLEKIQQPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFDR
ADCLISEEVFASVKDSIEVDDIVVVEGKVSRDVQRECNKLSVDKVQPISQYIDENFSKVE
LTLRSQNINPTNLKKVLSNLKENIASTNIQKQNILEITVSLDDVDGKFDYLQKPFSIYKF
VNDVSKLIAEGSTVSLSGV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcatcttagagttcataccggatattctgttgttgatagtacagtgcgccta
ggcgatctttttgcaagagcaaaagataaaaatattgttgcagtagctcttactgatgta
tgtaatttatttgctgcagttaagttttataaacaagctttagctagtgggattaagcca
atctttggagttgagctaaaggtcgatactgaatttggcatatgtgatttagtattatta
gcggagaataatcaaggttatcaaaatattgttaaactagtctcaaaagcatatcaagaa
gctgataggtttggttcaattcctcttatacctaaatcttggcttagcgaggtaaaacta
gaaagtgtcatttgcttaaatggtggtcagcaaggagagttaggtaaagctatcttagct
aaagattatatcaaggcagatgagattattaaccaaaatattgagatatttgggactaat
aactatatcattgagattcataagttagagtatgagaatgaaggtttgtataatgaaaaa
gctctagaatacgcaagtaaatacaatctcatagctgtagcaacaaacttaactgtattt
atggaagcagatgattatgatattcatgaaattagagcttgtatcaatgagaagacaact
atcttagatgagtcgcgtaaatctaaatttactaaagaacaatatctaaaatcagctgat
gaaatgtatgaaactttctctgcactgccagtacttgtagataatacactagcaattgct
aagcgttgtaatgtcacatttgagttaggtaagccgtgtttaccgactgtcgatattccc
gctggtttaacagaaaaagagtacttttcaaaactgtgctatcaaggtttagataagcgt
ttagaaaaaattctagaaaataggtcagctgataagcatgaacatatcataaaagtctat
aaagatagggtacaacgagaaattgatatcatttgtgatatgggtttcccaggatacttt
ctgattgtcgaagattttatccgctggtcaaaagaaaatgatatccctgttggaccaggt
cgtggttctggtgctggttcattggtggcgtattctttgttaattactgatatagatcca
ttaccttatggattactttttgagaggtttttgaatcctgaaagagtatcaatgcctgat
tttgatatagatttttgtatccaaggtagagatagggttatcaagtatgttgagcaaaaa
tatggcaaagagagtgtcgcacagattattacctatggtacgatggctgctaaaggtgtt
gtgcgtgatgtcgtacgggtaatgggccaaagttttggttttggtgataggattgcgaaa
ttaatcccagaaacaccagggacaacatttaagaaaattcttcatgaaggcgagccattg
tatgaggaaatgcaagcagatgaggacgttgccgaaattatcgagaaggctcaaaaactt
gaaggtttgccgcgtagcttaggtaagcatgctgcgggaattgtgatatcaccgacaaaa
atttctgattttgcacctgtgtattgtgaggataagggtggagatattgtaacgcaattt
gataaaggtgatgttgaagatgttggtctggttaaatttgactttttaggactaaaaaac
ttaacgatcatcaataatactgttaaaagcattaatactaaaagaccagctgatcaaaaa
cctttagatatcgctgatatacctttagatgatcaaaaaacatttaagctgttacaagct
ggtaatactacggggatatttcagcttgagtctcaaggtatgcgtcagattgtcaaagat
cttggtacttctaattttgaggagattattgctctagtggcgttatatcgtccgggaccg
atggagaatatcccaacatttattgatcgtaagcatggtagaaaacagattacttacttg
catccgttacttgaaggagtactaaaagaaacttatggtattccagtatatcaagagcag
gttatgcagatggcacaaaaacttgcaggctatactcttggtggagcagacttattacgc
cgtgctatgggtaagaaaaaacctgaagagatggaaaaacagcgtaaaatcttcaaagaa
ggtgccgctaaacatcataatattgataccaagcttgctgacgagatatttgaccaaatg
gaggcttttgctggttatggttttaacaaatcacatgctgctgcatatgccttgattgcg
tatcaaacagcttggttaaaagcacattatccagatgaatatatggctgctttaatgtca
ggagatatggggaatactgatcagctcgttaaatttatcctagattgtaaaaatatgggt
atcacagttctagcacctaatgtaaacaaaagtgtctatgactgtatagctgtctcaaaa
ggaacgatcttgcttggcttaggagctatcaaggggcttggtggtgaggctatcaaaagt
atacttacagagagagatatagctggagagtttagctctatatttgatttatgtcgcagg
gttgatttacgcaaagttaataaaaaagcgcttgaagcattatgttatgcaggcgctatc
aaagatatctctaaaaatagagcaacagcgtttaattctatcgaaaaagctatcaaaaat
gctggttatgtcaatgagatgaatgctgctgggcaggatgatttatttggttttacagag
caagagagtgatactgatgcagaactagagagagaatgtatagtagaagaatggaatctt
aaagagttgcttattaatgagaaaaaagctttaggaatgtatttctcaggacatattatt
gacgaggagagccactggcgcaatcatgttagctttagtgaccttgaaaaaattcaacaa
cctaatatggatggtaattccgtaagaattatcgcaagtatgataactccaccagcaaga
cgtaaaactaagactggtcgagttttatatattatcaatattgatgatgagtttgataga
gctgattgtttgattagtgaagaggtttttgctagtgttaaagatagtattgaggttgat
gatattgttgttgtagagggcaaagttagtcgtgatgtacaacgagaatgtaataagcta
agtgtagataaagttcaaccaatatcacaatatattgatgaaaattttagtaaagttgaa
ctaacattaagaagtcaaaatataaatcctactaatctcaaaaaagttctcagtaatctc
aaagaaaatatagcctcaaccaatatccaaaaacaaaatattttagaaataacggtttct
cttgatgatgttgatggtaagtttgattacttacaaaagccattttctatctacaaattt
gtcaatgatgttagcaagctaatagctgagggtagcacagttagtttgagtggggtttaa
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