Francisella cf. novicida Fx1: FNFX1_0928
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Entry
FNFX1_0928 CDS
T01937
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fcf
Francisella cf. novicida Fx1
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcf03016
]
FNFX1_0928
Enzymes [BR:
fcf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FNFX1_0928
Transfer RNA biogenesis [BR:
fcf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FNFX1_0928
Prokaryotic type
FNFX1_0928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AEE87314
LinkDB
All DBs
Position
complement(952382..953158)
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AA seq
258 aa
AA seq
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MKNYLLQIEYFGKNYCGWQRQSHSPSVQEELEKALSKIANQNIEVTCAGRTDTGVHATSQ
IINFYSDAERPLSAWQRGVNALLPQDIKILAVQQVDNNFNSRFTAINRTYNYIIYNSATS
SPIFAEHCLWENRELDIDKMNQACEYLLGEQDFSSFRSSQCQSNTPFRNIQKAEFIKQGS
FIVFEVVGNAFLHHMIRNLVGSLLKVGLGFESPEWIKVVLEAKDRTQAAETAKAHGLYFV
GVEYPEFSFKRQIIKLFC
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactacctactacaaatcgaatactttggcaaaaactactgtggttggcaaaga
caatctcattcaccaagtgtgcaagaagagcttgaaaaagcactttcaaaaatagcaaat
caaaatatagaagttacttgtgcagggcgaactgatacaggcgtgcatgcaacttcacag
attattaatttttattctgatgcagagaggcctttaagcgcatggcagcgtggggtaaat
gctttgctacctcaagatattaaaatattagcagttcaacaagttgataataattttaat
tctaggtttacagctataaatagaacttacaattatattatctataattctgcaactagc
tcaccaatattcgcggaacattgcttatgggagaatagagaacttgatatagataagatg
aatcaagcttgtgaatatcttcttggcgaacaagattttagttcttttagatcatcacaa
tgtcagtcaaatacaccatttagaaatatccaaaaagctgagtttatcaagcagggtagt
tttattgtttttgaggttgttggtaatgcttttttacaccatatgattagaaatttagta
ggctcattattaaaagtaggcttaggttttgaatctccagaatggattaaagtagtatta
gaagctaaagatagaacacaagcagctgagacagctaaagcacatggtttgtattttgtc
ggtgttgaatatccggaatttagcttcaaacggcaaataattaaattgttttgttag
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