Francisella cf. novicida Fx1: FNFX1_0944
Help
Entry
FNFX1_0944 CDS
T01937
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fcf
Francisella cf. novicida Fx1
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FNFX1_0944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcf03021
]
FNFX1_0944
Transcription machinery [BR:
fcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FNFX1_0944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
PspA_IM30
Motif
Other DBs
NCBI-ProteinID:
AEE87330
LinkDB
All DBs
Position
complement(969191..970924)
Genome browser
AA seq
577 aa
AA seq
DB search
MTKEDLLSDLKDLMIDGRERGYLTRADILDALPGDVSEDPKIYEEIEAILIDAGIDVYDR
TPQIEEDDERKVSEANLDDLKGKTSDPIRMYMREMGIVDLLDKKGETDIAIRIEEGTTEV
FSTILSYPIVIKTYIERFRELEEKAIDYMNSQDIENEPVARYIRFNEVMAGFSDEQVTEE
KVAEDDHEEKIDTQRAYEFFTNLEKMFEEYQDKPNKKLYTKIVKELDNLRLSTSHLQKLV
DYIRLPYARVKEFERKILRLCVERSKTPRQEFIKVYKVGSLEWLEPLTKKYKFTENTIRE
IKNLTKQINQFQILMMMDIEELKQVNLEISRSEAKITQAKKEMIEANLRLVVSEAKKYTN
RGLHFLDIIQEGNIGLMKAVDKFDYRKGFKFSTYATWWIRQAITRSIADQARTIRVPVHM
IETINKVNRIKRQILQEKGREATEEEIIEHTPNMTKEKLKKILNISHTPISMESPIGDDE
DSTVGDFIEDKNNYSPIEAANLENLREAIKELIETGLTEREAKVLMMRFGIGMNTDHTLE
EVGKQFNVTRERIRQIEAKALRKLKHPSRSAFLKTFL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagatttgctctctgatttaaaagatttgatgattgatggtagggaaagg
ggatatttaactagagccgatattttagatgctctaccaggagatgtttcagaagatcct
aaaatatatgaagaaattgaggctatacttattgacgctggtattgatgtctatgataga
actcctcagatagaagaagatgatgaaagaaaggttagtgaagctaatcttgatgattta
aaaggtaaaacttcagatcctattcgtatgtatatgcgcgaaatgggtattgttgatctt
ttagataaaaaaggcgagacggatatcgctattaggatcgaagaaggtactacagaagtt
tttagtacgattttaagctatccgatagtaattaaaacttatattgagcgttttcgtgag
ctagaagaaaaagctatagattatatgaattcccaagatattgagaatgagcctgtagct
agatatatccgttttaatgaagttatggctggttttagtgatgaacaggtaactgaagaa
aaggttgctgaagatgatcatgaggaaaaaattgatactcaaagggcttatgaattcttt
acaaatttagagaaaatgtttgaagaatatcaagataagcctaacaaaaaactttatact
aaaatagttaaggaactcgataatttaagattgtcaacatcacatttacaaaagttggtt
gattatattagattaccttatgctcgagttaaagaattcgaaagaaaaattttaagactc
tgtgttgaaagatcaaaaacaccacgccaagagtttattaaagtttataaagttggttct
ctagaatggttggagcccttaactaaaaagtataaatttactgagaatactattagagaa
ataaaaaatttaactaagcaaattaatcaattccaaattttaatgatgatggatattgaa
gagcttaaacaagtcaatcttgagatttcaaggagtgaagctaaaattactcaagcgaaa
aaagagatgatagaagcaaacttaaggctagttgtttctgaagctaaaaagtataccaat
agaggcttacatttcttagatattatccaagaaggaaatattggcttaatgaaagctgta
gataagtttgattatcgtaaaggctttaagttctcgacatatgctacttggtggatacgt
caagcaattactcgttcgattgcagaccaagctagaactattcgtgtacctgtacatatg
attgagacaatcaataaagtaaatagaattaaacgtcagattctacaagaaaaagggcgt
gaagctacagaagaggagattatcgagcatactcctaatatgactaaagagaagctgaaa
aagattcttaatatttcacatactccaatttcaatggagagcccaattggtgatgatgaa
gattctacagtaggcgattttattgaggataaaaataactattctccgatagaagcagct
aatttagaaaatttacgcgaagcaataaaggagcttatcgaaactggcttaactgagaga
gaagctaaagttctaatgatgcgttttggtattggtatgaatactgatcatactttagaa
gaagtaggtaagcagtttaatgttactagagagcgtattagacaaattgaggctaaggct
cttagaaagcttaaacatccttctagatcggcatttttgaaaacatttttgtaa
DBGET
integrated database retrieval system
