Francisella cf. novicida Fx1: FNFX1_1002
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Entry
FNFX1_1002 CDS
T01937
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf03030
DNA replication
fcf03430
Mismatch repair
fcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNFX1_1002
03430 Mismatch repair
FNFX1_1002
03440 Homologous recombination
FNFX1_1002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcf03032
]
FNFX1_1002
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1002
Enzymes [BR:
fcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNFX1_1002
DNA replication proteins [BR:
fcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNFX1_1002
DNA repair and recombination proteins [BR:
fcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNFX1_1002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEE87388
LinkDB
All DBs
Position
complement(1020531..1021223)
Genome browser
AA seq
230 aa
AA seq
DB search
MSRQVFIDTETTGFDYKIGNRIIEFGAVEVIDRRITGNTLHFYCNPNYEVEAGALAIHGL
TNEFLADKPLFEDKVDEMIEFLRGAEVIIHNAAFDVPFINWELGLLRNNKYGTLEQNVAR
IVDSLDLARKKHPLQKNNLDALCKRYQIRNDHRTFHGALLDSELLADVYLAMTGGQTNLS
LQTAKTVSKNSIDIDVNKLNLRNAEDSISDISVHHSYLSNLLKLEEDAKW
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacaagtttttatagatactgagacaactggctttgattataagatcggtaat
agaattattgaatttggtgcagttgaagttattgatagaaggataacaggtaatactttg
catttttattgtaatccaaattatgaagttgaagctggagctttagctattcatggtctt
acaaatgaatttctagcagataaacctctttttgaggataaagttgatgagatgattgag
tttttaagaggtgctgaagtaatcattcataatgcagcttttgatgtgccatttataaat
tgggaacttggtctcttaagaaataataaatacggaacactagagcaaaatgttgctaga
atagtagatagtcttgatttagctagaaaaaaacatccattacaaaaaaataatcttgat
gctctatgtaaaagatatcaaattaggaatgatcatcgtacctttcacggagcattatta
gatagtgagctgttagcggatgtttatctagctatgacaggtgggcagactaatttaagt
ctgcaaacagccaaaactgtgagcaaaaatagtattgatattgatgtcaataaactaaac
ttacgtaatgctgaagatagtattagcgatatttctgtacatcatagttatcttagtaat
ttgctaaaactagaagaagatgcaaaatggtaa
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