Francisella cf. novicida Fx1: FNFX1_1096
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Entry
FNFX1_1096 CDS
T01937
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
fcf
Francisella cf. novicida Fx1
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcf03032
]
FNFX1_1096
03036 Chromosome and associated proteins [BR:
fcf03036
]
FNFX1_1096
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1096
DNA replication proteins [BR:
fcf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FNFX1_1096
Chromosome and associated proteins [BR:
fcf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FNFX1_1096
DNA repair and recombination proteins [BR:
fcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FNFX1_1096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Lmo2446-like_N
HU-DNA_bdg
DUF3562
Motif
Other DBs
NCBI-ProteinID:
AEE87482
LinkDB
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Position
complement(1110667..1110939)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELVSAIAKEADVTKEVASNTLDATIAAVTKALKNGDSVTLVGFGTFQVKERSPREG
RNPKTGETIKIPASKVPSFKAGKGLKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagtgaattagtaagtgctatagctaaagaagcagatgttactaaagaagtt
gctagcaacactctagatgctaccattgcggcagtaactaaagctttaaaaaatggtgat
agcgtaactctagtaggttttggtacttttcaggtaaaagaaagaagtcctagagagggt
agaaacccaaagactggtgaaactattaagatccctgcttctaaagttcctagctttaaa
gctggcaagggtcttaaagacgctgtaaaataa
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