Francisella cf. novicida Fx1: FNFX1_1138
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Entry
FNFX1_1138 CDS
T01937
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
fcf
Francisella cf. novicida Fx1
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcf03021
]
FNFX1_1138
Transcription machinery [BR:
fcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FNFX1_1138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_25
Sigma70_r1_2
DUF7383
HTH_28
IF2_N
NirdL-like_HTH
SpoIIID
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
AEE87524
LinkDB
All DBs
Position
complement(1154075..1154953)
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AA seq
292 aa
AA seq
DB search
MANKKLLPATKTKTLPVVSDNNLSAYLNFVNTLPVLSLEQEQELARRYKYKKDLDAAQQL
VLSHLRFVTKIARNFSGYGLSIADLIQEGNIGLMKAVSKFDPDQGVRLVSFAVHWIKAEM
HDYVLKNWKIVKVATTKAQRKLFFNLRSSKDKIGWLSSEDIKELAEELGVKEETVIEMEK
RMCQGDASLDLPYTDDDGEQTSQQSLYLEDKSSNIEHQVVQQDYYDNFKAIVKDVLSGFD
TRTKDIIMSRYLLDNKATLQDLAAKYNISAERVRQIEEDALAKLKKAIKNRS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaaaaattattaccagctacgaagacgaaaactttaccagttgtatctgat
aataatctcagtgcgtatttaaattttgtcaatactttaccagtattatcactagagcaa
gagcaagagctagcaagacgctataaatataaaaaagatctagatgctgcacagcaactt
gtgttatcacatttacgctttgttactaaaatagcaagaaatttttcaggttatggactt
tcaatagctgaccttattcaagagggtaatattggtcttatgaaagctgtaagtaagttt
gacccagatcaaggtgttagattagtttcatttgcagttcattggattaaggcggaaatg
catgactatgtcctaaaaaactggaagatagtcaaggttgctaccacaaaagcacagcgt
aaattattttttaatcttagaagtagtaaagacaaaattggttggttaagctcggaggat
atcaaagagttagccgaagagctaggtgtcaaagaagaaactgtcatagagatggagaaa
agaatgtgtcagggggatgcaagtcttgatttaccatacactgatgatgacggtgagcaa
acttcgcagcaaagtttgtatctagaggataagtcttcaaacattgagcatcaagttgtt
cagcaagattactatgataatttcaaagcgattgtaaaagatgttttaagtggttttgat
acacgtacaaaagatattatcatgtcgcgctatctacttgataacaaggcaactcttcag
gatctagctgctaaatataatatctcagccgaaagagtacgccaaattgaagaagatgct
ttagctaagcttaaaaaagctatcaagaatcgctcttaa
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