Francisella cf. novicida Fx1: FNFX1_1168
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Entry
FNFX1_1168 CDS
T01937
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fcf
Francisella cf. novicida Fx1
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1168
Enzymes [BR:
fcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FNFX1_1168
DNA repair and recombination proteins [BR:
fcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FNFX1_1168
Prokaryotic type
FNFX1_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEE87554
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Position
1185179..1186573
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AA seq
464 aa
AA seq
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MSKKIAIHWFRQDLRLADNPALYQASQADETITIFILDKNQDIGSASKLWLHHSLNSLNS
SLDNKLNFYSGNPLEIIKKIIKENNITDFYWNRCYDKYSIDRDTQIKQFLQQHKINVNSF
NGSLLIEPWQCKKDDGTHYKVYTPFYKELIKIRKYRSNIAKPNFSYLRKLNNSENLDSLK
LLQPKHSWQNIIKQWQIGESASHQILEEFLDNKVKEYKTARDFMSTDSTSKLSPYLHFGE
ISPNQIFNAVQSLDYIGNNEEHFIKELVWRDFSYYQIYYYPELHNKNINQKFDSFKWDND
PTLLKKWQKGQTGIPIVDAGMRELWQTGYMHNRVRMIVASFLIKNCLIHWKYGEKWFFDT
LFDADFASNNANWQWVAGCGLDAAPYFRIFNPVLQAEKFEAYEYIRKYVPELKLLPNKLI
AKPWEASELVLKEAGITLGQNYPKPIVDLKKSRDRALQLHNQIK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaaatagctatacattggtttcgtcaagatttacgcttagcagacaatcct
gctctatatcaggctagtcaagccgatgaaacaattacaatatttatactagataaaaat
caagatataggtagtgcaagtaaactttggctacaccattctttaaatagcttaaatagt
tctctagacaataaacttaacttttatagtggtaaccctctagaaattataaaaaaaatt
atcaaagaaaataacattacagacttctattggaatagatgttatgacaagtacagtata
gatagagatacccagattaaacagtttctgcaacaacataaaataaatgtaaatagcttt
aatggtagtttacttatagagccatggcaatgcaaaaaagatgatggtacgcactataaa
gtttacactccattttataaagagcttatcaaaataagaaaatatcgctcaaatattgct
aaaccaaattttagttatctaagaaagcttaataattctgaaaatttagactcattaaaa
ctgctacaaccaaaacactcttggcaaaatataataaaacaatggcaaattggtgaaagt
gcttctcaccaaatacttgaggagtttttagataataaagtaaaagaatacaaaacagct
agagacttcatgagcacagactcaacatctaaattatcgccataccttcatttcggtgag
atatctcctaaccaaatttttaatgctgtacaaagtttagactatataggtaacaatgaa
gagcactttatcaaagagttagtttggcgtgatttttcttattatcaaatatattattat
ccagaattacataacaagaatatcaaccaaaaatttgatagttttaaatgggataatgat
cctactcttctcaagaaatggcaaaaaggacagactggcattccaatagtagatgctgga
atgagagaactttggcagactggctatatgcacaatcgcgtacggatgattgttgctagt
tttcttatcaaaaactgtcttattcattggaaatatggcgaaaaatggttttttgatacc
ttatttgatgctgactttgcaagtaataacgctaactggcaatgggtagcaggctgtggt
ttagatgcagcaccctactttagaatttttaacccagtgttacaagctgaaaaatttgaa
gcttatgaatatatccgtaagtatgtaccggaactcaagcttttgcccaataaattaatt
gccaaaccatgggaagctagtgagctagtattaaaagaagctggtatcacactaggtcag
aactatccaaaaccaatagtagatcttaaaaaatctcgtgacagagctttacaattacat
aatcaaataaagtaa
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