Francisella cf. novicida Fx1: FNFX1_1316
Help
Entry
FNFX1_1316 CDS
T01937
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf00061
Fatty acid biosynthesis
fcf00071
Fatty acid degradation
fcf01100
Metabolic pathways
fcf01212
Fatty acid metabolism
fcf02024
Quorum sensing
fcf04146
Peroxisome
Module
fcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FNFX1_1316
00071 Fatty acid degradation
FNFX1_1316
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FNFX1_1316
09145 Cellular community - prokaryotes
02024 Quorum sensing
FNFX1_1316
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fcf01004
]
FNFX1_1316
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcf04147
]
FNFX1_1316
Enzymes [BR:
fcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FNFX1_1316
Lipid biosynthesis proteins [BR:
fcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FNFX1_1316
Exosome [BR:
fcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
FNFX1_1316
Exosomal proteins of breast cancer cells
FNFX1_1316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
Motif
Other DBs
NCBI-ProteinID:
AEE87702
LinkDB
All DBs
Position
1343912..1345603
Genome browser
AA seq
563 aa
AA seq
DB search
MSTFSNKTWISNYPDYTPENITENHATILDLYEKTIIQFPYREAVSCHDVNLTFMELDKL
ATKMASFLQNNLGINKGDRVAIVLPNCLQFTVSLFACVKVGAVFVNTNPLYTADEIEAIF
NNCNVKAAIVMDMFAHHIQKARVNIDSLENVIVTNIADLYPFPKKQIIGFVSKYLIENKP
KYTKSNFIAFSKVIKADISLYKKPVLTKQDILCLQYSSGTTGRPKGAILTHDNLASNIQQ
VWAWIKHDMDMSDQVIITALPLYHIFSLSANLLCFFFAGAKNVLIPNARDIKNLIKTMSK
NEFTIFNGLNTLYMAMLEHPDFEKINKTRYLYSLSGGMPISRKIYLEWLDRTGVELKEGY
GMTEMSPAIALNKFNESEDDYFGTCGYPIPSTELSIRDIHTHQEITECFKEGEIWLKGPQ
RCQGFWNDKENNELHFTADGWLKTGDIGYIDKKGRLTISDRIKNMIIVSGFNVYPREIEL
CILKLDYVREVAVTGVKSKTSGERPIAFISLEKGSNATEEDIIKHCKDKLASYKVPRSCI
FVETLPKNNTGKIDIKKLKNQFL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtacattttccaataaaacatggatatctaattatcctgattatactcctgagaat
attacggaaaaccacgctacaattttagatctatatgaaaaaacaattatacaatttcct
tacagagaggctgtatcatgtcacgatgtaaatctaacttttatggaacttgacaagctt
gctactaaaatggctagttttctacaaaataaccttggaatcaacaagggagatagagtc
gcaattgtactacctaactgcttacaatttactgttagtttatttgcatgtgttaaggtt
ggtgcggtatttgtcaacactaaccctctttatactgcagatgagattgaagcaatattt
aataattgtaatgtcaaagctgcgattgtaatggatatgtttgcccatcatatacaaaaa
gctcgtgtaaacatcgactctttagagaatgtaatagttacaaatattgctgatttatac
ccatttcctaaaaaacagattattggttttgtctctaaatatttaattgaaaataaacca
aagtatacaaaaagtaattttattgcgtttagtaaagtcatcaaagctgacataagttta
tataaaaaacctgttttaacaaaacaagatatactatgtttgcaatactcaagtggaaca
actggaagacctaaaggagcaatactaacgcatgataatcttgcctcaaatattcagcaa
gtttgggcatggatcaaacatgacatggatatgtctgatcaagtaattataactgcacta
cctctctaccatatattctcactaagtgctaatttactttgcttcttttttgctggtgca
aaaaatgtcttaattcccaatgctagagatataaaaaacctcattaagactatgtcaaaa
aatgaattcactatttttaatggtcttaataccctttatatggcaatgcttgagcatcct
gattttgagaaaattaacaaaacaagatatctgtattctttaagcggaggcatgccaatt
tcacgcaaaatatatttagaatggttagatagaactggtgtagaactaaaagagggttat
ggtatgactgaaatgtctccggcaatcgctctaaataaattcaatgagtctgaggatgat
tattttggtacttgtggctatcctattccgagcacagagctcagtattcgtgatatccat
actcaccaagaaataactgagtgtttcaaagaaggtgaaatctggcttaaaggtccacaa
agatgtcaagggttctggaatgataaagagaataatgaactccattttactgcagatggt
tggctaaaaactggagatattggctatatagacaaaaaaggtcgtctaactatatccgat
agaattaaaaatatgataattgtctccggttttaatgtttatccgagagaaattgagtta
tgcatacttaagttagactatgtaagagaggtagctgtcactggagttaagtcaaaaaca
tctggtgaaagacctatagcttttatctcattggaaaaaggctcaaatgcaactgaggaa
gatattatcaaacattgcaaagataaattagcaagctacaaagtccctagatcatgtata
tttgtagaaactctaccaaaaaataatactggtaaaatagatattaagaaactaaaaaat
cagttcttataa
DBGET
integrated database retrieval system
