Francisella cf. novicida Fx1: FNFX1_1522
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Entry
FNFX1_1522 CDS
T01937
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FNFX1_1522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1522
Enzymes [BR:
fcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FNFX1_1522
DNA repair and recombination proteins [BR:
fcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FNFX1_1522
Prokaryotic type
FNFX1_1522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OspG_kinase
Motif
Other DBs
NCBI-ProteinID:
AEE87908
LinkDB
All DBs
Position
complement(1574602..1575264)
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AA seq
220 aa
AA seq
DB search
MTWSDILAEEKQQPYFKQILDFLACESAKGKVIFPAKENIFNAFKYTELDNLKVVILGQD
PYHNYNQAHGLAFSVQKGVDIPPSLQNIYKELARSIPEFKIPNHGYLVDWAKQGVFLLNT
TLTVEAHKANSHKDIGWETFTDTVISKISENKHNVVFMLWGSHARKKKVLIDSLKHLILE
STHPSPLSAHRGFLGCNHFVDCNKYLIEKKSQKIDWNLLC
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtcagatatcttagcagaagaaaaacaacaaccttattttaaacaaatactt
gactttttggcatgtgaaagcgctaaaggtaaggtaattttcccagctaaggaaaatatt
tttaatgcttttaagtatactgagctagataatctaaaagtagtcattttagggcaagat
ccatatcataactataaccaggctcatggtttagcgttctcagtgcaaaaaggggtagat
attccaccatcattgcaaaatatctataaagagcttgcccgcagtattccagaatttaaa
attccaaatcatggttatttagttgattgggcaaagcaaggagtctttttattaaatact
actttgacagttgaggctcataaagcaaattcgcataaagatataggttgggagactttt
acggatactgtaattagcaaaatttcagaaaataaacacaacgttgtgtttatgctttgg
ggttcgcatgcgcgtaagaaaaaagttcttattgatagtttaaagcatttgattttagag
tctacacatccatcgccgttatcagcacatagaggttttctaggctgtaatcattttgtt
gattgtaataagtatttgattgaaaagaaaagccagaaaatagattggaatttactttgc
tga
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