Francisella cf. novicida Fx1: FNFX1_1538
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Entry
FNFX1_1538 CDS
T01937
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FNFX1_1538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1538
DNA repair and recombination proteins [BR:
fcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FNFX1_1538
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GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
AAA_14
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEE87924
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Position
1594777..1597311
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AA seq
844 aa
AA seq
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MQDISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNG
ESIPMAGVPYHAAEAYIAKIVKKGLSIAICEQTGDPNTSKGPVERQVTRIITPATVSEEA
FLDSNQDSILVSIFEKNNKYYLAYTSYTQGKIYLVKTLTSLNELKNTVLKLSPQEIITNS
RELAQQNPFKKPIKALEEWYYSNFEAKKYINDSLDTNIANNILNLYKNDQLTTIGSILSY
LTNILKDTPRHITDISYEQEQDTLNIDINSRINLELDNNSKSSLLSIIGKCKTSLGSRLI
KRYFSNPTRNLNILATRHNIINSLGENQYFLKIQDVLSYISDIERIISRVALGTVKPKDL
VALHDSLEQLPILKKLLSEKNTPEITNINNRIHQLDELVTLLDKAIIENPPATIRDGGVI
KEGFDKELDELKSIKDNSYDFLIKFEELQKQKTGISTLKVGYNRVHGYYIELSKQHADKI
PTEYVRRQTLKASERYITEELKNFEDKVLSSKEKALAREKLIYDTLLKKVIEYYKQIQET
AASIAEIDVLANFAERAIKLKLSQPKFNNLAKLELKEVRHLAIEHNIDEPFIPNDTLLSK
DTNTLQIITGPNMGGKSTYMRQVAQLIFLAYIGSFVPASYADICDIDTIYTRIGASDDIS
SGRSTFMVEMTETAYILNNASAKSLVIMDEIGRGTSTFDGLALAKACAEKFAQIGAFTLF
ATHYFELTELAKQYPNVCNIHFEAKEYKDNIYFMHKAVTGAAKKSYGIQVAKLAGISQDV
LESAKQNLYNLEKKQHLAESTQIQAQFELEPTTQNPLQQKLDAIDINTITPLEALNILFE
LKKR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatatttctaatcacaccccgatgatacaacaatatttgaaaattaaatcacag
tatcaagatatattattattttaccgtatgggcgatttttatgagcttttttttgatgat
gctaaaaaagctgcggaacttttagatattactctgactgctcgtggtaaatcaaatggt
gaatcaatcccgatggctggagtgccatatcatgccgctgaagcctatattgcaaaaatt
gtcaaaaaaggtctatcgattgctatctgtgagcaaactggcgatccaaacacttcaaaa
ggtcccgttgagagacaagtgacacgtattataactccagcgacagtttctgaagaagct
tttttagacagcaatcaagatagtattcttgtgagtatttttgaaaaaaataataagtat
tatttagcatacacaagctatacgcaaggaaaaatttatctagttaaaacactaactagc
ctaaatgagctaaaaaatactgttctgaaattatcacctcaagaaattattactaactct
cgcgaacttgctcagcagaatccttttaaaaaaccaattaaagctttagaagaatggtat
tatagtaattttgaggcaaaaaaatatatcaatgattctcttgataccaatattgctaat
aatatcctaaatctttataaaaatgatcaactaacaactattggctcaatacttagctac
cttacaaatattctcaaggatactcctaggcatattactgatatcagctatgaacaagag
caagatacgcttaacattgatataaatagtcgtataaatcttgagctagataataactca
aaaagtagcttacttagcataattggtaaatgtaagactagccttggcagtcgtttaata
aaaaggtattttagcaatccaacaagaaatttaaacattttagctactcgccataatatt
ataaacagtttaggtgaaaatcagtatttcttaaaaattcaagatgtgcttagttatatc
agtgatattgaaaggataatctcacgagtagcacttggaactgtaaaacctaaagatctt
gtcgcactgcatgactcccttgagcagctaccaatactcaaaaaactcctcagtgaaaaa
aatactccagagattacaaatatcaataaccgcatccaccagcttgatgagcttgttaca
cttttagataaagcgattattgagaatcccccagcaaccattcgtgatggtggcgtcatc
aaagaaggttttgataaagaactagatgagctaaaaagcataaaagataattcttatgat
tttctaatcaagtttgaagaattacaaaaacagaaaactggcataagcactctcaaagtt
ggttataaccgtgtccatggctactatatcgaattatctaagcaacatgctgataaaatc
ccaactgagtatgtcagacgccaaaccttaaaagctagtgaacgctatatcaccgaagag
ctaaaaaactttgaagataaagtcctttcatcaaaagaaaaggctctagcccgtgaaaag
ttaatctatgatactctattaaagaaagttatcgaatactacaagcaaatccaagaaact
gccgcaagtattgctgaaatagatgttttagcgaattttgctgaaagagctattaagctt
aaacttagtcaacctaagtttaataacttagcaaaattagaacttaaagaagttcgtcac
cttgctattgagcataatattgatgagccatttatcccaaacgatactttactaagcaaa
gatactaataccctacaaataataactggtccaaatatgggcggtaaatcgacatatatg
cgccaagttgcacagctaatatttctagcttatatcggctcatttgtaccagcaagttat
gcagatatttgtgatattgatactatctacacaaggattggtgcatctgatgatatttct
agcggtagatcaacttttatggttgaaatgactgaaacagcctatattctcaataatgct
agtgccaaatcactagtaataatggatgaaataggtcgtggcacaagtacttttgatggt
ttagcattagctaaagcatgtgcagagaagtttgcacaaataggggcttttactttattt
gcaacacattattttgagctaacagaattggctaaacaatatccaaatgtatgtaacatc
cattttgaagcaaaagaatataaggacaatatctactttatgcacaaagctgttacagga
gcggctaaaaaatcctatggcatccaagtagccaaacttgccggaatatctcaagatgtt
ctagagtcagcaaagcaaaatttatataatcttgagaaaaaacagcatttagcagaatca
acccaaatccaagctcaatttgagttagaaccaacaactcaaaatcctttacaacaaaaa
cttgatgctatcgatattaatacaataacacctctagaagcactaaatattctctttgaa
ctaaaaaaacgctaa
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