Francisella cf. novicida Fx1: FNFX1_1630
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Entry
FNFX1_1630 CDS
T01937
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf03420
Nucleotide excision repair
fcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FNFX1_1630
03430 Mismatch repair
FNFX1_1630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1630
Enzymes [BR:
fcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FNFX1_1630
DNA repair and recombination proteins [BR:
fcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNFX1_1630
MMR (mismatch excision repair)
Other MMR factors
FNFX1_1630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
DUF4252
AAA_11
CarD_TRCF_RID
SseB_C
Motif
Other DBs
NCBI-ProteinID:
AEE88015
LinkDB
All DBs
Position
complement(1697871..1700093)
Genome browser
AA seq
740 aa
AA seq
DB search
MSNYDFTLGLNPEQQKATLLEDRNALILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQQRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLVKKVINNLDLDDKKYPPKLLQNFINKQKDKAIRSNKLTKQYDANYAHIYTAYEERLQL
DNALDFADLLLHLYELFSFNQQLREYYQNKFKYILIDEFQDTNHVQYMWLKLLITDNNYM
MAVGDDDQSIYGWRGAVVDNIHNYVKDLKNVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVELYCAVNERDEAKYIIDKIRQLHNDGVDYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEIKDALAYLRLAVTNSDNLAFERIINTPTRGIGNKTL
ETIRNYAQINSLSYWQATLDVIQKELVTKRTASLLLKFIELINGISAQISQHSLDKLLES
VINQSGLLASYQEKNSEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGDMQADEATDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIVNSEEVFDNTSSKKMQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFVAEIDSQHLSQGKLEFA
AAKPKTKQKANFGMSPFDFLKSNNTTNSFKPGDKVFHKVFGKGVFIKAQAQGTKEFYTVD
FGIDVGQKILLADIANLVKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattatgactttaccttaggattaaatccagagcagcaaaaagctacattacta
gaggatcgtaatgctttgattctcgctggtgctggcagtggtaaaacaaaagttttaaca
tcacgtatagcttatctttgtcgtgataaaggcgtatctgtagaaaatatccttgccgta
acattcactaataaagcagcaaaagagatccagcagcgtgtagaaaagatgcttgggatt
tctacattcggaatgtggataggtacttttcatggtattgcacatagactattgcgtaag
catgctcatgaacttggcttagataagaactttaggatacttgatcaagatgagcaggca
caactggttaaaaaggtaattaataatctagatcttgatgataaaaaatatccgcctaaa
ttactgcagaatttcatcaataaacaaaaagataaagctatccgtagtaataaactaaca
aagcagtatgatgccaattatgcgcatatttatacagcttatgaagaaagacttcagctt
gataatgctttggattttgcagatttgcttttacatctttatgagcttttttcttttaat
caacagcttagagaatattatcaaaacaaatttaaatatattttgattgatgagtttcag
gatactaaccatgttcaatacatgtggctaaaattacttataactgataataactacatg
atggcagttggcgatgatgatcagtcaatatatggttggcgtggtgctgtcgtagataat
atccataattatgtaaaagatctcaaaaacgttgaaattataaaactagaacaaaactat
cgctcaacaaaaaatattctaaaagtagctaattcagtaatcaaaaataatgataatagg
atgtcaaaggagctgtggtcagcagctgaagatggtgaaaaagtagagctttattgtgcc
gtcaatgagcgtgatgaggcaaaatatattatagataaaattcgccagctacataatgat
ggtgttgattatagtgatatagctatcttatatcgttcaaactatctatcacgtgtctta
gaggaaagttgtatttatgcaagtattccatataggatttatggcggttttaggttcttt
gatagagcagagattaaagatgctttagcatacttaagattagctgttacaaatagtgat
aatttagcatttgaacgaattattaacacaccgacacgaggaattggtaataagacatta
gagacgattagaaattatgcgcaaattaattcattatcatattggcaagctactttagat
gttattcaaaaagagcttgtaactaaaagaacggcaagtttacttttaaagtttatcgaa
ttaattaatggtatttcggcacaaataagtcagcatagcttagataagctcttagaatca
gtaataaatcaaagtggtcttttagcatcatatcaagaaaaaaatagtgaaaaggatcgc
caaaagattgataacttaaaagagttgataagtgcagctaaagattttgaaccacagata
gagttacttgatgataatactgacatactacaagatttcttgtcatttgctgttctagaa
gctggtgatatgcaagctgatgaagctacagatagtgtgcagttaatgactattcatgct
tcaaaaggtttagagtttcgttatgtgtttctagttgctgcagaagaaggggtttttcca
ccaagttcaattgttaactctgaagaggtgttcgataatacaagctctaagaaaatgcaa
gagaagcttgctgaagagcggcgccttttttatgtagcagtaacaagagctatgaaagcc
ttaactataagttatgcacaagtacggaatatctttggtcgtagtagttttcaagttaag
tcacgtttcgttgcagagatagactctcagcatttgagtcagggtaaactagagtttgca
gcggctaaacctaaaactaaacaaaaagcaaattttgggatgtcgccttttgattttctt
aaatcaaataatactactaatagttttaaacctggtgataaagtatttcataaggttttt
ggcaaaggagtatttataaaagcgcaagcacaagggacaaaagagttttatactgtagac
tttggtatagatgttggtcagaaaatactgctggcagatattgctaatctggttaaggtc
tga
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