Francisella cf. novicida Fx1: FNFX1_1640
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Entry
FNFX1_1640 CDS
T01937
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fcf
Francisella cf. novicida Fx1
Pathway
fcf03030
DNA replication
fcf03410
Base excision repair
fcf03420
Nucleotide excision repair
fcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNFX1_1640
03410 Base excision repair
FNFX1_1640
03420 Nucleotide excision repair
FNFX1_1640
03440 Homologous recombination
FNFX1_1640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcf03032
]
FNFX1_1640
03400 DNA repair and recombination proteins [BR:
fcf03400
]
FNFX1_1640
Enzymes [BR:
fcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNFX1_1640
DNA replication proteins [BR:
fcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FNFX1_1640
DNA repair and recombination proteins [BR:
fcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FNFX1_1640
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNFX1_1640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEE88025
LinkDB
All DBs
Position
complement(1710063..1712756)
Genome browser
AA seq
897 aa
AA seq
DB search
MKKIVLVDGSSYLFRAYHALPHLTNSQGEPTGAIIGVINMLKKLPIMYDTEYVAVVFDAK
GKNFRHQLYPQYKAHRKDIDDELRVQIQPLHQIIEKMGFAVIIEDGVEADDVIGTLAKNL
QKQGYQIIISTGDKDMAQLVTDNIVLYDSMKNVTTDVAGVLEKYQISPHQIIDYLALMGD
ASDNIPGIPKVGPKTAVKWLQDYQNIDGIIANQQQIKGKVGENLRNNIDLLKLSYQLATI
KCDLELDLTVEDLKCKAADKAYLIEAYTRYEFKSLLKDLDNSDIKIATSQAQAADVAIEY
ITITTQTQLDDLIAELEKSDSFAFDTETDSLNTYEANLVGLSFCAKEGRAFYIPLQHRYL
GVPQQLELGFVLDKLKPLFADSKKVKVAHNFKFDEKVLSKYAIEINGKVDDTMIMAYVLK
SSGKHDMDSLSKEHLGIEPIAYTAIAGTGKQQQTLDQVDIEIVAKYAAEDADITFRLFNH
FKALLEQDKVLFKLYCELEMPLTIILNQMEKTGVKIDATKLIQQSASLETSIKELESKCY
NLAGQEFNLSSPVQLREILFEKLGLPPVKKTAKGQVSTSEEVLVQLAEDYEIAALIMKYR
HLSKLKNTYTDKLPKMLDANGRVHTSYNQTGTVTGRLSSSDPNLQNIPIKSPEGRKIREA
FIAEDGYCIVAADYSQIELRIMAHLSKDKNLLKAFNQNLDIHSATAAEVLGISIDEVSSE
QRRKAKAINFGLIYGMSAFGLARQLEIPRAEAQEYIDIYFNRYPSVKEYMTTAKEFAKQN
GYVETILGRRLYLPEINSKNVMQRNAAERAAINAPMQGTAADIIKKAMINVNMMISQEYN
SEIKMVMQVHDELVFEVKKTKLEEIVAKIKSIMEAAVKLNVPLEVNVDSGKSWDQAH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattgttttagtggatggctcttcatatctttttagggcttatcatgcttta
ccacatcttactaatagccaaggtgagcctacgggagcaatcattggtgttatcaatatg
cttaaaaaattacccataatgtatgatactgagtatgttgcggttgtttttgatgcaaag
ggtaagaactttcgtcatcagttatatccacaatataaagcacatcgtaaagatatcgat
gatgagctaagagtgcaaattcaaccattacatcagattattgagaagatgggatttgct
gtaatcattgaagatggtgtcgaggctgatgatgtaataggtaccttagcgaaaaatctt
cagaaacaaggttatcaaattattatctctactggcgacaaagatatggcacagctagtt
acagataacatagtcttatatgactcaatgaaaaatgtcactacagatgttgctggagtg
ctagaaaaatatcaaattagtccacatcagatcatagattatttagccttaatgggagat
gcatcagataatatcccaggtattccaaaagttggtcctaaaacagcagttaaatggtta
caagactatcaaaatattgatggtataatcgcaaaccagcaacaaattaagggtaaggtt
ggtgaaaatctacgtaacaatattgatttactcaagctatcttatcagttagcaacaatt
aaatgtgatcttgagcttgatttgactgtagaggatctgaaatgcaaggctgctgataaa
gcatatttgatagaagcttatacaagatatgagtttaaatcattattgaaagacttagat
aatagcgatattaagatagcaacaagccaagcacaagctgctgatgttgctattgaatat
attactattaccacacaaactcagcttgatgatctgattgcggaactagagaaatctgat
agctttgcttttgacacggaaacggattctttaaatacttatgaagcaaacctagtgggc
ttatctttttgtgcaaaagagggacgagctttttatattccattacaacatagatactta
ggcgtgccacagcaactagaattaggatttgtcttagataagctaaaaccattatttgca
gattctaagaaagtaaaagttgcacataacttcaaatttgatgaaaaagttctatcaaaa
tatgcgattgagataaacggtaaagtcgatgatacgatgattatggcgtatgtactaaaa
agtagtggtaagcatgatatggatagtctttctaaagagcatcttggcatagaaccaatt
gcttatactgcaatagctggtactggtaaacagcaacaaactctggatcaggtagatatc
gagatagttgctaagtacgctgctgaagatgctgatattacttttagactttttaaccac
tttaaagctttattagagcaagataaggttctttttaaactttattgtgaactcgaaatg
cctttgactatcattcttaatcagatggagaaaacaggtgttaagatagatgctactaag
cttatacagcaaagtgctagtcttgaaacatctatcaaagagcttgaaagcaaatgttat
aacctcgctgggcaagaatttaacctatcttcaccagtacagttaagagaaattcttttc
gagaagctaggacttcctccagttaaaaaaacagcaaagggtcaagtgtcgacttctgaa
gaggtactagttcaattggctgaggactatgaaatcgcagcattgataatgaaatatcgc
catttatcaaaacttaaaaatacatatacagataagctacctaaaatgttggacgcaaat
ggtcgtgtacatacttcatataatcaaactggtaccgtaacaggtaggctatcctcatcg
gatcctaatttacaaaatattcctataaaaagtcctgaagggcgtaaaattagagaagct
tttatagctgaggatggttactgtatagttgctgcagattattcacaaattgaacttaga
atcatggcacatttatcaaaagataaaaaccttctcaaagcgtttaatcaaaacttagat
atccatagtgcaacagctgctgaagttttaggtattagtattgatgaggttagtagtgag
caaagaagaaaagctaaagcaataaatttcggtcttatctatggtatgagtgcttttggt
ttagctagacagttagaaatacctcgagctgaagcgcaagaatatattgatatctatttt
aatcgttatccaagtgtcaaagagtacatgactacagcaaaagagtttgctaagcaaaat
ggctatgttgaaactatactaggaagaagattatatttaccagagattaactcaaaaaat
gttatgcagcgtaatgcagcagagcgagcagcgattaacgcaccaatgcagggcaccgct
gctgatattatcaaaaaagcaatgataaatgttaacatgatgatctcacaggagtataat
agcgaaattaagatggtgatgcaggttcatgatgagcttgtttttgaagttaaaaaaact
aagcttgaagagatagttgcgaagataaaatctataatggaagcagctgtaaagcttaat
gtgcctttagaggtgaatgttgattctggtaagagctgggatcaagctcattaa
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