Flavobacterium cupriresistens: LNP23_03045
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Entry
LNP23_03045 CDS
T10329
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fcg Flavobacterium cupriresistens
Pathway
fcg03410
Base excision repair
fcg03430
Mismatch repair
fcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LNP23_03045 (recJ)
03430 Mismatch repair
LNP23_03045 (recJ)
03440 Homologous recombination
LNP23_03045 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcg03400
]
LNP23_03045 (recJ)
DNA repair and recombination proteins [BR:
fcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LNP23_03045 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LNP23_03045 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LNP23_03045 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
VPS11_C
Motif
Other DBs
NCBI-ProteinID:
UFH43200
LinkDB
All DBs
Position
642468..644168
Genome browser
AA seq
566 aa
AA seq
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MRWTLKPKPSQDKINHLAQALNVEDFVATLLIQRGIETFEEAKNFFRPSLEHLHDPFLMK
DMDKAVVRIEAAINNQENILVFGDYDVDGTTAVSLVSSYLKSHYPNVATYIPDRYDEGYG
ISFKGIDFADDNGFSLIIALDCGIKSIDHIAYAKERNIDFIICDHHRPGEFLPDAVAILD
PKREDCFYPYDELCGCGVGFKLIQALGKNRNETIADLVPYLDLVATAIAADIVPITGENR
VLAYFGLQVINSAPRPGIKALVHQIKKQVLDISDVVFIISPRINAAGRIKHGNHAVELLT
EFNFEQAQQFASEIEQYNADRKDLDKKITKEAFQQILENNEQDRFSTVVFQEDWHKGVIG
IVASRLIETYYRPTLVFTKSGDKYAASARSVKGFDVYNALDACSEHLEQFGGHMYAAGMT
LKAENYKPFKAAFEKQIEKTILPEMRTPEIEIDAQINFTDLTPKLIRILKQFEPFGPQNM
TPVFMTADIKDTGYAKTLGADEEHLRLFVKQNGSDGIAAIGFGLGKKIDITKNQNTFQLA
YCIAENEWNNTISTQLMLKDIRTNER
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggactttaaaacctaaaccttctcaagataaaatcaaccatttggcgcaagcc
ttaaatgtagaagattttgtggcaacacttttgattcagcgtggtattgaaacttttgaa
gaggctaaaaatttctttcgtccttcgttagagcatctgcacgatccattcctcatgaag
gacatggacaaagcggttgtccgcatagaagcggcaatcaacaaccaggaaaacatactg
gtttttggagattatgatgttgacggaacaacggccgtttcattggtttcttcgtattta
aaatctcattatccgaatgttgccacttatattccggatcgttacgacgaaggttacggc
atttcttttaaaggaattgactttgccgatgacaacggattttcactaattatcgctctt
gactgcggaatcaaatcaattgaccacattgcctacgcaaaagaacgaaacattgacttt
attatttgcgatcaccacagacccggagaatttctgccagacgctgtagccatcttagac
ccaaaaagagaagattgtttctatccgtatgacgaattatgtggttgcggagtaggcttt
aaattaattcaagccttagggaaaaacagaaatgaaactatcgccgatttagttccttat
ctcgatttagtagccaccgcaattgccgcagatattgttccgattacaggagaaaacaga
gttctcgcttatttcggattgcaagtaatcaatagtgctccaagacctggaattaaagct
ttggttcatcagataaaaaagcaagttttagatatctctgacgttgtttttatcatttca
ccccgaataaatgctgcgggaagaatcaaacacggaaatcacgcggtagagctattgacc
gaatttaattttgaacaagcacaacaatttgcctcagaaattgagcaatacaatgcagat
cgcaaggatctggacaaaaaaatcaccaaagaagcttttcaacagattctagaaaataac
gaacaagaccgcttttctaccgttgtatttcaggaagactggcacaaaggtgtaatcgga
attgtagcttcaagattaattgaaacctattaccgtccgaccttggttttcacgaaaagt
ggcgataaatatgctgcttctgcccgatcggtaaaaggttttgatgtgtataatgcactg
gatgcctgctcagaacatctcgagcaatttggaggtcatatgtatgctgccggaatgaca
ctgaaagcagaaaactacaaaccctttaaagcggcttttgaaaaacagatcgaaaaaacc
attttaccggaaatgcgaactccggaaatcgaaattgatgctcaaatcaatttcacagat
ttaactccaaaactgatccgaattttaaaacagtttgagccttttggaccacaaaacatg
acgcccgtttttatgaccgctgatataaaagataccggttatgccaaaacattgggtgcc
gacgaagaacatttaaggctttttgtcaaacaaaatggttcagatggaattgccgccatt
ggatttggacttggaaaaaaaatagacatcacaaaaaatcaaaatacgtttcagcttgcg
tactgcatagccgaaaacgaatggaacaacactatttctactcaacttatgttaaaagac
attagaacaaatgaaagataa
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