Flavobacterium cupriresistens: LNP23_04465
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Entry
LNP23_04465 CDS
T10329
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
fcg Flavobacterium cupriresistens
Brite
KEGG Orthology (KO) [BR:
fcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcg01011
]
LNP23_04465
Enzymes [BR:
fcg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LNP23_04465
Peptidoglycan biosynthesis and degradation proteins [BR:
fcg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LNP23_04465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
Pathogen_betaC1
Motif
Other DBs
NCBI-ProteinID:
UFH43474
LinkDB
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Position
complement(986516..988360)
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AA seq
614 aa
AA seq
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MIVKKISLAVSAFFSIAAFAQDVANTDAPIKPEVKISYLDSVKSTFKKDELATRVDSLWM
NELVSLDIYDDLTKDIQTINSDVSVNEELPTELLKERLQAMNGKSPFEIEYNQGLENIIK
SFLKNRKKSFSRLMSLSEYYFPIFEDAFAKQNVPLEIKYLAVVESALNPKAVSKMGATGI
WQFMYGTGKQYALKIDSYIDERSDPLKATAACSEYMTKMFNIFGNWELVLASYNSGPGNV
TKAIRRSGGKTKYWDIRNHLPKETQGYVPAFLATMYLFEYHKEHGINPQRAVVKNFETDT
VQVKSQMSFKQIADLLDMPQAQIQLLNPSYKLNIVPFYQNEAHYLRLPKDKVATFVSNED
KIYAYVKHDSEFKGLPIQLAMKVAPKAKAKVKVDAKVEKDIQDIQFYKVRKGDNLGSIAS
KYDVSIPELKKWNNIKTNTVAYGKTLKIKANDPLAKNSKELKTPDLDRKANEEAIAAADH
KEKATEQSQEYIVASGDNLGSIAKKFGTTIADLKELNSLTSNNIVLGKTLVVSKNTAVIE
EVTVETKAIASNSVDSFKKKAASKDLGKDYYVKKGDSLYSISKKYPGVTISDIKKWNGIK
DDDLKPGMKLKING
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaaaaaaaatttccttagcggtttcagcttttttttcgatcgctgcttttgca
caagatgttgcaaatacagacgctccaattaagcctgaagtaaaaatatcgtatttagat
tcggttaagagtactttcaaaaaagatgaactggctacacgtgtagacagtctctggatg
aatgaattagtgagcctggatatatacgacgatttaacaaaagacattcaaaccatcaat
tctgatgtttcggtcaatgaagaattgccaaccgagttgctcaaggagcgactgcaggcc
atgaatgggaaatcgccttttgaaattgagtacaatcagggacttgaaaatattataaaa
tcgttcttgaaaaacaggaaaaaatcgttttcacgattgatgtccttatcagaatactat
tttccaatttttgaggacgcctttgccaagcaaaatgttcctttggaaattaaatattta
gccgttgtagaatctgctttaaatcctaaagcagtttctaaaatgggcgccacaggaatt
tggcaattcatgtacggaaccggaaagcaatacgcgcttaaaatcgattcctatattgac
gaacgcagtgatcctttaaaagcaactgcagcctgttcagaatacatgaccaagatgttt
aacatctttggcaattgggaacttgttttagcctcttacaattcaggacccggaaatgtt
actaaagcaattcgtcgttccggcggaaaaacaaaatactgggatattcgcaatcacctt
ccaaaagaaacacaagggtatgttcctgctttcctggctaccatgtatctttttgaatac
cataaagaacacggtattaatccacaaagagctgtagtaaaaaacttcgaaaccgatacg
gttcaggttaagtcgcaaatgtcattcaaacaaatagctgatttgttagacatgccacaa
gcacagattcaacttttaaatccttcatacaaattaaatatagtaccgttttatcaaaac
gaagcgcattatctgcgtttgccaaaagataaagtggcaacttttgtttctaacgaggat
aaaatttacgcatacgtaaaacacgattctgaatttaaaggtcttcctatccaactggct
atgaaggttgcacctaaagcgaaagcgaaagtaaaagtcgatgcgaaagtagaaaaagac
atacaagatatccaattttataaagttcgtaaaggagacaatctaggttcaattgcaagt
aaatatgatgtttcgattccggaattaaaaaaatggaacaatatcaaaacgaacacggta
gcttacggtaaaacgttaaaaatcaaagcaaatgatccgctagctaaaaattcgaaagag
ttgaaaactccggatttggatagaaaagcgaatgaagaagctattgcagctgcagaccat
aaagaaaaagcaacggagcagtctcaggagtatattgtggcaagcggagataatttaggt
agtattgctaaaaaattcggtacgactattgctgacttaaaagaactaaatagtctgact
tcaaataatattgttttaggaaaaactttggtagtttctaaaaacacagctgttattgaa
gaggttactgtagaaacgaaagcaattgcttcaaattctgttgattcattcaaaaagaaa
gcagcatcaaaagacttaggtaaagactattacgttaaaaagggagattcattgtatagt
atttctaaaaagtatcctggagtaacaatttcagatattaaaaagtggaatggaattaaa
gatgatgatttaaaaccgggaatgaaacttaaaataaacggataa
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