Flavobacterium cupriresistens: LNP23_05300
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Entry
LNP23_05300 CDS
T10329
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fcg Flavobacterium cupriresistens
Brite
KEGG Orthology (KO) [BR:
fcg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LNP23_05300 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcg03019
]
LNP23_05300 (rnc)
03009 Ribosome biogenesis [BR:
fcg03009
]
LNP23_05300 (rnc)
03036 Chromosome and associated proteins [BR:
fcg03036
]
LNP23_05300 (rnc)
Enzymes [BR:
fcg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LNP23_05300 (rnc)
Messenger RNA biogenesis [BR:
fcg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LNP23_05300 (rnc)
Ribosome biogenesis [BR:
fcg03009
]
Eukaryotic type
90S particles
RNase
LNP23_05300 (rnc)
Prokaryotic type
rRNA processing factors
LNP23_05300 (rnc)
Chromosome and associated proteins [BR:
fcg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LNP23_05300 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
Mycovirus_RNAse
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
UFH43634
LinkDB
All DBs
Position
1192303..1193043
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AA seq
246 aa
AA seq
DB search
MNIIKKIFSKSRSQEDGIFFGSIQKILGFQPGSIDFYKKAFTHRSSNKQDEKGNPINYER
LEFLGDAMLSAVIAAHLFNKAPNGDEGYLTKMRSKIVSREHLNELGKDLNLVRFVESKVP
IHHFGENIHGNIFESLIGAIYLDKGYPFCEKFIQKRVITPYVDIARLEGKVISYKSLVIE
WCQKEKKIFHYDIFEDNGIDGQRLFGVKLSIDDKVIARARATSKKKAEEKASQRAYFAFQ
EKIDKK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcaaaaaaatattttcgaaatcccgttctcaagaagacgggatttttttt
ggcagtattcagaaaatactgggttttcagcccggttcaattgatttttataagaaagcg
tttacgcaccgatcttctaataagcaagacgaaaagggaaatccgattaattacgaacgt
ctggaatttctgggtgatgccatgttaagtgctgtaattgcagcgcatctgtttaacaaa
gcacccaatggagatgaaggttatttgacaaaaatgcgttcgaaaatcgtgagccgtgag
catttgaatgaattggggaaagatttgaatttagttcgctttgtagagagcaaagtaccc
attcatcattttggagaaaatattcatggtaatatttttgaatctcttattggcgctatt
tatctcgataaaggatatcctttttgtgaaaagtttattcaaaaaagagtcattacacct
tatgtagacattgcccgacttgaagggaaagtaattagttataaaagtctggttatcgaa
tggtgtcagaaagaaaaaaagatctttcactatgatattttcgaggacaacggaattgat
ggtcaacgtttgtttggcgtaaaattaagtatagacgataaagtaattgcgagagcaaga
gcaacttcaaaaaagaaagcagaagaaaaagcatcacaaagagcttattttgcatttcaa
gaaaaaatagataagaaataa
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