Flavobacterium cupriresistens: LNP23_16080
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Entry
LNP23_16080 CDS
T10329
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fcg Flavobacterium cupriresistens
Pathway
fcg03030
DNA replication
fcg03430
Mismatch repair
fcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LNP23_16080 (holA)
03430 Mismatch repair
LNP23_16080 (holA)
03440 Homologous recombination
LNP23_16080 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcg03032
]
LNP23_16080 (holA)
03400 DNA repair and recombination proteins [BR:
fcg03400
]
LNP23_16080 (holA)
Enzymes [BR:
fcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LNP23_16080 (holA)
DNA replication proteins [BR:
fcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LNP23_16080 (holA)
DNA repair and recombination proteins [BR:
fcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LNP23_16080 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
UDI
UPF0113
Motif
Other DBs
NCBI-ProteinID:
UFH41323
LinkDB
All DBs
Position
complement(3779314..3780318)
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVVKIVNDIKAGNIKPIYFLMGEEPYYIDKLAEYMEKNLLAEEEKGFNQTVLYGRDVS
VEDIVSTAKRYPMMADRQVVIVKEAQDLSRTIDKIESYVVNPMETTVLVFCYKYKTLDKR
KKVTKLLAQKGVVFESKKLYENQVGDWIKRVLAGKKYTIDPKANAMLVEFLGTDLSKINN
ELEKLQIILPQGTVITPQHIEENIGFSKDYNVFELRKAIGERNQIKAYKIAENFAHNPKE
YPLVMTTGLVFGFFIQLLKYHGLKDKNPKNVATAIGVNPYFLKEYDLAIKNYPMRKVSQI
IGALRDIDVKSKGVGANALPQSDLLKEMLYKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgtaaaaattgtaaatgatataaaagccggaaatattaagccaatttat
tttttaatgggtgaagagccttattatattgataagttagcagagtacatggagaaaaat
ctacttgcagaagaggagaaaggattcaaccagactgttttatacggaagagatgtttct
gtcgaggatattgtttcaacggctaagcgctatccgatgatggctgatcgtcaggttgtt
atagtgaaagaagcgcaggacttatccagaactattgacaaaatagaatcttatgttgtc
aatcctatggaaactacggttttagtcttttgttacaaatacaaaacacttgataaacgt
aaaaaagtaaccaaactattagctcaaaaaggagttgtctttgaaagtaaaaaattatac
gaaaatcaggttggtgactggatcaaacgggtattagcgggaaaaaaatatacaattgac
cccaaagcaaatgccatgctggttgaatttttaggtaccgatttaagtaaaatcaataat
gaacttgaaaaattacagattattttgccacaaggaactgtaattacgccacaacatatt
gaagaaaatattggtttcagtaaagactacaatgtttttgaattaagaaaggcaatcgga
gagcgcaatcagattaaagcgtacaagattgcagaaaactttgctcacaatccaaaagaa
tacccgctggtaatgacaaccggactggtatttggattttttatacaactactgaaatac
cacggacttaaagacaagaatccgaaaaatgtagctacagccatcggagtaaatccttat
tttctaaaggaatacgacctggcgataaagaattacccgatgcgaaaagtaagtcaaata
ataggcgcattacgcgatattgatgtaaaaagtaaaggagttggggcgaatgcattacct
caatcagatttgttaaaagaaatgctttacaaaatatttaattaa
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