Falco cherrug (Saker falcon): 102046052
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Entry
102046052 CDS
T02911
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fch04131
]
102046052 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fch04812
]
102046052 (SPAST)
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
102046052 (SPAST)
Membrane trafficking [BR:
fch04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102046052 (SPAST)
Cytoskeleton proteins [BR:
fch04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
102046052 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
AAA_24
IstB_IS21
NPHP3_N
DUF815
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
102046052
NCBI-ProteinID:
XP_014140825
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MGNEFAVALNVATAKPGAGRTPGVLPWRTVAVLERLSGNSAPDCPCGVGWLRRKEIFRRV
LAGQKEQAVEWYKKGIEELEKGIDVLVIGQGDQCERARRLQSKMRTNLAMAKDRLQLLEK
LQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTSNSLPRSKTVAKSGS
TGLSGHHRTPSYSGISSSSVSRPASNPAASTHKAAPKNSKTNKPSTPTTAPRKKKDLKIF
RNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARG
LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSI
IFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVL
RRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAA
LGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAYIRWNKDFGDTTV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgagtttgctgtagccttgaacgtagccacagcaaaaccaggggcagggcgc
accccgggagtgctgccctggcggacggtggcggtgttggagcggctctcgggaaactcg
gccccagactgcccctgtggagtcggctggcttcgaaggaaagaaatatttcgtcgtgtt
ttggcaggacaaaaggaacaagctgttgaatggtataagaaaggaattgaagaactggaa
aaaggaatagatgtcttagtaattggtcaaggtgatcagtgtgaacgggctcgacgtctg
caatctaaaatgaggacaaatttggcaatggccaaggatcgcttgcagcttttagagaag
ctgcaggcagttttgcaaatttccaagccgcaaatggaggtctataatgacagtactaac
ctggcatgccgcaatggacatctccagtcagaaagtggagctgttccaaaaaagaaggat
cccttaacacacacgagtaattcccttccccgttcaaaaactgttgcaaaaagtggatcc
acaggcctttcaggtcaccatagaactcctagctacagtgggatatcgtcttcttctgtg
tctagaccagcatctaatcctgcagcttcgactcacaaggctgctcctaaaaacagcaaa
acaaataagccttctactcctaccactgctcctcgaaaaaagaaagacttgaagatattt
agaaatgtggacagtaatcttgctaatcttatcctgaatgaaattgttgatagtgggcca
gctgtcaaatttgacgatattgcagggcaggaactggctaaacaagctctgcaagaaatt
gttatccttccttctcttagacctgagttatttacaggacttagagctcctgcacgtggt
ttattgctgtttggcccaccaggaaatgggaagacaatgttggccaaagcagttgctgca
gaatccaatgctaccttctttaatataagtgcagcgagcttaacttcaaaatacgtgggt
gaaggggagaaactggtgcgtgcactatttgcagtagccagagaacttcagccttctata
atttttattgatgaagttgatagccttttgtgtgaaagacgagaaggtgaacacgatgct
agtagacgtctaaaaacagaatttttaatagaatttgatggtgtgcagtcttctggagag
gacagaatacttgtgatgggagcaacaaacaggccacaggagcttgatgatgctgttctc
agacgattcaccaaacgggtatatgtgtctttaccaaatgaggagacaagattgattttg
ctaaaaaatcttctaagcaagcaaggaagtccattgacccaaaaagagttggcgcaacta
gctagaatgacagatggatactctgggagtgatttaaccgcattagcaaaggatgcagcg
ctgggccctatccgagaattaaaaccagaacaggtgaagaacatgtctgccagtgagatg
agaaatatcaaactatcagatttcactgagtctttgaagaagataaagcgcagtttgagc
cctcagaccctggaagcatatattcgctggaacaaggactttggagataccacagtgtga
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