Falco cherrug (Saker falcon): 102046174
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Entry
102046174 CDS
T02911
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04510
Focal adhesion
fch04512
ECM-receptor interaction
fch04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102046174 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102046174 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102046174 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fch00535
]
102046174 (COL9A1)
Proteoglycans [BR:
fch00535
]
Extracellular matrix (ECM) proteoglycans
Others
102046174 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102046174
NCBI-ProteinID:
XP_005432005
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MKSNWKITAFFCMCSFLWSFISATIQQQSRLPAILGASQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIQRVVGSTSLQVAYKLGPNGDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVAVNLNGQMKSVEFSYKGVDGHLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCIKIETLNIKPKGKISIDGVAVLGKLKNNPQISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGLPGKGLLGP
PGPAGAAGLPGEVGRSGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDLLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGLPGILGVRGITGIMGPKGT
KGARGLDGEPGPQGLPGAPGDQGQRGLLGEAGPKGERGPQGTRGINGLPGPKGEPGLPGV
DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGVKGIPGPKGNRGPPGVPGLMGN
SGKQGERGPEGEVGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLPGS
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDPGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAASLR
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGLKGYPGPRGLPGEPGKASYGREGRDGERGPPGMAGQPGVPGPPGPPGPPGYCE
PSSCRVQAGQRAGKNMKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagctttcttttgcatgtgtagttttctgtggtctttc
atctcagccacgatccagcaacaatcaagactaccagccattctgggtgccagtcagaga
acagatctctgcccaacaatcaggattggtcaagacgacttaccaggctttgacctgatt
tctcagttccaaatagaaaaagctgcttcccaaggaattatacagagagtagtgggctcc
acttctttacaagtggcttataaattgggacccaatggagacttcaggatcccaaccagt
gccatatattccaatggacttcccgacgaatattcctttctaactacttttcggatgact
ggggccacacttcagaaatactggactatttggcaaattcaggattcttcaggaaaagaa
caagtggcagtgaatcttaatggtcaaatgaaaagtgttgagttttcttataaaggagtg
gatggacatctccaaactgcgtcatttttgcatttgcctttcttgtttgactcccagtgg
cacaagcttatgataagtgtggaagcaaacagtgtcacgctttttattgactgtattaaa
atagaaaccttaaacataaaaccaaaagggaaaatcagcattgatggcgttgctgtgctt
ggaaaacttaaaaataatcctcaaatttctgttccgttcgaaatccagtggatggtgatt
cactgcgacccactgcgaccccagcgtgaaggctgtggtgaactgccagcccggataagc
cagacggtaatcgagagaggtctccctggtccaccaggccccccaggtccgcccgggccg
ccaggagttcccggtattgatggcattgatggtgagagaggtccgaacggcccccccggt
cctccaggtccagatggggatgcaggcaaaccaggatcccctggcctgcctggagagcca
ggagctgatggattcacaggacctgatggctcacgtggagccacagggccaaagggacag
aagggtgagccaggactgccaggtgctcgtggacttccaggcaaggggctccttggacca
cctggtccagctggggcagcaggacttcctggagaagtaggtcgttctggtccacctgga
gatccaggaaaaagggggccaccagggccaccaggaccaccaggtcctcggggaacaatt
ggcctgcaagacggtgacctgttgtgtcccaatgcatgtccacctggccgcccaggacat
gctggcttaatgggaatgaagggacagaaaggttcaaaaggagagtctggtgaaccagga
aaacaaggttataagggtgaagaaggggaccaaggacccagtggtgaagtgggagctcaa
ggccttccaggcatcctaggtgtccgaggtataactggtataatgggacctaaaggtacc
aaaggagctcgtgggcttgatggtgagcctggaccccaaggtcttcctggtgcacctgga
gatcaaggacagagaggtttactaggagaggcaggtccgaagggagaaaggggtcctcaa
ggtacaagaggaataaatggtctccctgggccaaaaggagagcctggcttaccaggagtc
gatggccgggaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaacctgga
gctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggtgtgaaa
ggcattcctggcccaaagggaaatagaggtcctcctggggtgccaggtttgatgggaaat
tctggtaaacagggtgaacggggcccagagggagaagtgggtccaacaggacctcgtgga
ccaccaggtagcagaggggagccaggtcctgcaggtcctccaggtttaccagggaaatgg
ggtccccagggtgatattggacttcctggactgccaggtcctccaggcctacctggtagt
aagggtgaccggggttcggtgggtgaaccgggacctaagggtgaacaaggtgcacctgga
gcagaaggagatggaggagaaaagggtgacttaggtgatatgggactaccaggagcaaag
ggagctgttggtaatcctggagaccctggttcccgtgggcctgagggaagtcggggactg
ccgggcatggaagggccacgaggctcacctggaccacgaggcttgcagggtgaacagggt
gccccaggtctgcctggcagccaaggtccagctggaaaagaaccaactgatcagcacatt
aagcaggtttgcatgagagttatgcaagaacaactggctcagctggcagccagtcttagg
aggccagaatttggtgctccaggtcttcctggccgaccggggccaccaggtgctccaggc
cctgctggtgaaaatggcttcccaggacagcttgggccccgtggcttgcctggccttaaa
ggcccccccggtgagattggtcgtaaaggtcctaaaggtgaaccaggagaaagaggagaa
agaggatttccaggcagaggactgaagggttaccctggaccaagaggtcttccaggtgaa
ccaggcaaagccagttacggcagggaaggccgcgatggtgaacgaggtccccctgggatg
gctggtcagcctggggttcctggccctcctgggcctcctggccctcctgggtactgcgag
ccctcatcttgcagagtgcaggctggacagagagctgggaagaacatgaaagggccgtga
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