Falco cherrug (Saker falcon): 102046367
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Entry
102046367 CDS
T02911
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03013
Nucleocytoplasmic transport
fch03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102046367 (UPF2)
03015 mRNA surveillance pathway
102046367 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102046367 (UPF2)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102046367 (UPF2)
mRNA cycle factors
P-body specific factors
102046367 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
102046367
NCBI-ProteinID:
XP_027661442
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPANMDEKESTLNNKEKEFSERRPVSTREKPKEDVKVGMKRETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEERKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKESGKDESRDSKDAKDNKEASGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQVQDLEREFLIKLGIVNDKDSKD
SITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagaggaaaaagccagcaaatatggatgaaaaagaatctacattaaataat
aaagaaaaagaatttagtgaaaggcgaccagtaagcaccagggagaagccgaaagaagac
gtcaaagttggcatgaagagagagactttaaaggttccagaagataaaaagaaaaaactg
gaagaagataaaagaaaaaaggaagacaaggagcggaagaagaaagaagaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaggag
gagagaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcaactg
aaggaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaaccagaatgcaccagacaatcgccctgaggaaaacttcttc
agcagactggattctagtctgaagaagaacacagcttttgttaagaagttaaaaaccatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctatagtggaagccaaactgaaaatatcagatgtgaactgt
gctgtgcacttgtgttctctctttcaccagcgctatgctgattttgctccttcattactt
caggcttggaaaaaacatttcgaagcaaggaaggaagagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacacccatgtttctgtggttatcagcttttgtcggcactgtggagacgacattgccggt
ttggtaccaaggaaagtaaaaactgttgcagagaagtttaacctgagctttcctcctagt
gagatcattagcccagagaaacaacagcctttccagaatttgttgaaggaatactttaca
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcattccaagggagagctgagtgaagacagacacaaacaatatgaggag
tttgcaatgtcatatcagaagctgttggcaaattctcaatctctagctgatcttttggat
gaaaatatgcctgacctgccccaggagaaaccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggaagggggtatctgggaagat
gaagatgctagaaacttctatgagaatctcattgacttaaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatgttcccagaacaaggaatctggcaaagatgaatcaaga
gattcaaaagatgccaaagataacaaggaagcatctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgatcccctggagttagactgtggagatgaggcagaa
gatcttacaaaaaagctgcttgatgagcaagaacaagaggatgaagaagccagtactgga
tctcatttaaaacttatagtagatgcttttctccagcagcttccaaactgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagcgaacaga
agaaaactagtacgagcacttttcatagtgcctcgacagaggttggatttgctaccattt
tatgcaagactggttgccacattgcatccgtgtatgtctgatgtagcagaggatctttgt
tccatgctgaaaggggatttcaggtttcatgtaagaaaaaaggaccagatcaacattgaa
acaaagaataaaactgtgagatttattggtgaacttaccaagtttaagatgttctccaaa
aatgatactctccactgtttaaagatgcttctgtcagacttctctcatcaccatattgaa
atggcatgtactctgctggaaacctgtggacgattcctctttagatcaccagaatctcac
ttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcatcttgat
gcacgctatgttacaatggtagaaaatgcatattactactgtaatccccctccagctgaa
aaaactgtgaagaaaaaacgtcctcctttgcaggaatatattcgtaagcttctttacaag
gatctctccaaagtcaccacagagaaggtcctgagacagatgcgcaagctgccttggcag
gatgcggaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aatagtattcactgtgtagccaacctcttagcagggttggtcttataccaggaagatgtt
ggaattcatgttgtggatggagtactagaggatattcgactaggaatggaggttaaccag
ccaaagtttaaccaacggcggatcagcagtgccaagtttttgggggagctttacaattat
cgaatggtggaatcagctgtaatatttcgaactctgtattctttcacatcatttggtgtg
aaccctgatggtagtcctagtccactggatcctccagagcatcttttcagaatcagacta
gtttgtactatcctcgatacctgtgggcagtattttgacagaggatccagcaaacgtaaa
cttgattgcttccttgtatattttcagcggtatgtttggtggaagaaaagtctggatgtt
tggacaaaagaccacccatttcctatagacatagactatatgatcagtgatactctggaa
ctgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggtgcaa
gacttggaacgagaattcttaataaaattaggaattgtaaatgacaaagattccaaagat
tccattacagaaggagagaacctggaagaagatgaagaggaggaagaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctct
gacaatgaggaagaagaaggtgaagaagaggaggaagaaaacacagattatcttacagac
tccaataaggaaaatgaaactgatgaggagaatacagaagtaatgattaaaggaggagga
cttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatgatg
ctggaaaatcttcagcaacggagtggtgaatctgttaaagtacatcagttggatgttgct
attcctctacatctcaaaagtcaactgaagaagggtcctccgcttggtggtggggaagga
gagtcagagtctggagacacaatgccatttgtcatgttaacaagaaaaggcaacaaacag
cagtttaagatcctaaatgtaccaatgtcttcccaacttgctgcaaatcattggaaccaa
cagcaagctgaacaggaagagagaatgaggatgaaaaagctcactttggatatcaatgaa
cggcaagaacaagaggactaccaggagatgctgcagtctctggcacagcgtccagctcca
gcaaatactaatcgtgaacggcggcctcgttaccagcatccgaagggagcacctaatgca
gatctaatctttaaaactggtgggaggagacgttga
DBGET
integrated database retrieval system
