Falco cherrug (Saker falcon): 102046717
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Entry
102046717 CDS
T02911
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04382
Cornified envelope formation
fch04510
Focal adhesion
fch04512
ECM-receptor interaction
fch04518
Integrin signaling
fch04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102046717 (COL4A1)
04518 Integrin signaling
102046717 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102046717 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102046717 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102046717 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fch04147
]
102046717 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
fch00536
]
102046717 (COL4A1)
Exosome [BR:
fch04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102046717 (COL4A1)
Glycosaminoglycan binding proteins [BR:
fch00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102046717 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102046717
NCBI-ProteinID:
XP_027664534
LinkDB
All DBs
Position
Unknown
AA seq
1680 aa
AA seq
DB search
MAVDSVAERWRLHQGNRPAAVGVVLCPLRPMVGCSGCGKCDCSGVKGQKGERGLPGLQGV
IGFPGMQGPEGPPGPPGLKGDTGEPGLPGTKGTRGPPGASGFPGNPGLPGIPGQDGPPGP
PGIPGCNGTKGERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPG
QPGLPGPPGTPGFQGPMGPQGPPGEPGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVRGP
PGPPGPAPHMKEKGTEVIKGEKGDPGEKGEQGAPGLPGSGFRGEKGEPGKPGPRGKPGKD
GEPGPKGEPGLPGGYGVPGRPGEPGAKGDKGDRGFPGPPGRVIDPGPIDTFGEKGEPGVS
GLPGLKGQKGEKGFPGIQGIPGPPGRPLPDRIGSPGVPGERGEKGEKGSPGFALPGPPGR
DGFPGPPGLPGPPGPPGKTDGIDQCQQGEPGAPGSPGLPGRDGFPGEMGEKGDKGESCAL
CDKVGPPGLPGPQGPPGPAGFPGQSGFKGDRGLPGLDGLPGVPGPPGTPGLMGSPGAKGE
PGDFTYDSILKGEKGDPGFPGQPGTPGREGRPGKDGLPGLQGPKGASGTAGLKGERGPPG
QPGFPGVRGERGFPGPPGIGAAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPG
ADGLPGPPGFPGPQGDKGNPGLPGRPGLPGEKGAVGLPGVGFPGPPGPKGFQGQPGSPGL
PGTPGTPGLDGLPGVPGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGNPGLPGLRGEQ
GFPGIPGQQGFRGDPGLPGLQGLPGSPGAPGVGPQGSPGPAGQPGPQGPPGFPGIKGERG
FPGVPGLDMPGPKGDKGSQGQPGVPGSVGLPGLPGPQGAVGLKGSAGAKGEMGVMGTPGL
PGTPGPVGDPGLPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGKPGTMDTMDMVSLKGQ
KGDQGEKGDHGATGEKGLRGEYGEPGIPGKDGEPGTPGQPGPKGDPGPPGYPGDPGIPGQ
KGSVGEMGLPGTPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGIGFPGSPGEKGEP
GRTGSPGLSGDKGEKGSAGIPGMPGAPGPKGSPGMAGFPGSPGRHGEKGEKGLPGLSGIP
GLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGAAGAKGEQGIPGRGIPGFPGAKGDKGAKG
DVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGLPGLPGSAIEGPKGDRGPQGQPGLPGL
PGPTGPPGPPGLKGAKGEQGSNGWPGTPGSPGVKGDPGFQGLPGSPGSPGDTGPKGDLGP
PGVPGIPGPKGSPGFPGLKGERGDQGLPGSKGLQGPPGPPGAFQLVKGDPGLPGPVGPVG
LKGFPGLPGPKGQQGVTGPSGVPGPPGSPGFDGKPGQKGEAGPYGPPGPRGFPGPPGPEG
LPGAMGPPGAPSVAHGFLVTRHSQTTEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGT
AGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCS
VCEAPAMVIAVHSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFR
SAPFIECHGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggacagcgtggcagagagatggcgtctccatcagggtaaccgccccgcagct
gtgggggtggtactgtgccctttgcggcccatggtgggttgttccggttgtggaaaatgt
gactgcagtggagtaaaagggcaaaagggagaaagaggcttgccaggactacagggtgtg
attgggtttcctggaatgcaaggacctgaaggtccccctgggccaccagggcttaagggt
gatactggagaaccaggactaccaggaacaaagggaacaagaggccccccaggagcatca
ggctttccaggaaacccaggccttcctggcattcctggacaagatggccctcctggtcca
cctggcattccagggtgtaatggcacaaagggtgaaagaggtccagtaggtcccccaggt
ttaccaggactgactgggagcataggacccccaggacctccaggaatgaagggagatcca
ggtgaagtgattggtcttttacctcctagtgtgctaaaaggtgataaaggctttcctggc
caacctggactacctggtccacctggaactccagggtttcagggaccaatggggccacag
gggcctccaggagaaccaggtccccctgggccaccaggactcccaggcgaaaagggctac
atgggcttgggctttcagggtcccaaaggtgaaaagggagaacaaggagtaaggggcccc
ccaggacccccaggaccagcaccacatatgaaagaaaaagggactgaagtcataaaggga
gaaaagggtgatccaggtgaaaagggtgaacagggagccccaggattgccaggttcaggt
ttcagaggagaaaagggtgaacctgggaagcctggtccacgtggaaagcctggaaaagat
ggtgaaccaggaccaaaaggagaacctggtttgcccggtgggtatggggttccaggacga
cccggggagcctggtgcaaagggtgacaaaggtgatcgaggttttccaggacctccagga
agagttatagatcctggaccaatagatacctttggtgaaaaaggagagcctggagtttca
ggtttgcctggactgaaaggccaaaaaggtgaaaaaggtttccctggtatacaaggaatt
ccaggacctccaggtcgaccacttccagacaggataggatctccaggtgtccctggagag
agaggtgaaaaaggtgaaaagggttctccagggtttgctttacctggaccccctggaaga
gatggtttcccaggtcccccggggttgcctggcccaccaggtcctccaggcaaaacagat
ggaattgatcaatgccagcagggagaacctggtgcaccaggtagtcctggacttccagga
agagatggatttccaggagagatgggggagaaaggtgacaaaggtgaatcctgtgcctta
tgtgataaagtaggaccacctggacttccagggccacaagggccaccaggtccagcaggt
tttccaggacaatcgggtttcaagggtgacagaggcttacctggacttgatggccttcca
ggggtacctggcccccccggcactccaggacttatgggcagtcctggggcaaaaggagaa
ccaggagattttacttatgattctatcctgaaaggtgaaaagggagatcctggtttccca
ggacaaccaggtactcctggaagagaaggaagaccaggaaaagatggattgccaggtctc
cagggtccaaaaggagcatcgggtacagctggcttgaaaggagaacgtggtccccctggc
caacctggattccctggagtacgtggtgaaagaggttttcctggccctcctgggataggc
gctgcaggattacctggtgacaaaggagatagaggctttgctggaaccccaggtttacca
ggccttccaggagcaaagggtgaagcaggacgaactgtaccactccctggacctcctggg
gcggatggcctccctgggccacctggtttccctggaccccaaggtgacaaagggaatcct
gggcttccaggtagacccggtctgccaggagaaaaaggtgctgttggactgccaggtgta
gggttccctggacctccaggacccaaaggtttccaaggtcagcctggttcgcctggtctg
ccggggactccgggaacccctggactggatggtttgccaggtgtaccaggtttacaaggt
caaaaaggtgaacctggtgtaggtctacctggccctaaggggttgccaggccctccaggc
cctgctggcatccctggagaaaagggaaatccaggactgcctggcttacgtggtgagcaa
ggctttccgggcatacctggacagcaaggattcagaggagaccctggcctcccaggactg
caaggcttgccaggctctccaggtgcaccgggggtgggcccgcagggatcaccaggacct
gctgggcagccaggaccccaaggaccaccaggatttcctggaataaaaggagaaaggggc
ttccctggtgtcccaggcctagatatgccaggaccaaaaggggataaaggtagccagggc
cagcccggagtgccagggtctgtggggctacccggcctgccaggtccgcagggggctgtt
gggctgaaaggatcagcaggagccaaaggagaaatgggagttatgggaactcctggattg
ccaggaactcctggaccagttggagatccggggttgcctggtgaaaaaggtagccaaggt
ttcaaaggtgtagttggaccacagggtgatcctggtgtcaaaggagataaaggtgaagct
ggtctcccaggaaaacctggaacgatggacaccatggacatggttagtctcaaaggccaa
aagggagatcaaggagaaaaaggggaccatggagcaacaggagaaaaagggttacgcggg
gagtatggagaaccaggaattccaggaaaggatggtgaacctggtactccaggacagcca
ggaccaaaaggtgatccaggccccccagggtacccaggagatccaggaattccaggacaa
aagggatcagttggtgaaatgggtttgccaggaacacccggagaaaagggtctgccagga
gtaccaggttcaccaggcacaccagggttccctggccaaaaaggtgaaaaaggagacaaa
ggagcaccaggttttcctggaattggctttccagggtctcctggtgagaagggagaacca
ggaagaacgggtagtccaggtttatctggagataagggtgaaaagggtagtgcaggaatt
cctggaatgcccggtgccccaggtcccaaaggatcccctggcatggcaggatttccaggg
agccctggccgccacggagaaaagggtgaaaaaggacttcctggcttaagtggcattcca
ggtttaaaaggagaaccaggtgaacctggtgttccgggtcctgctggttccattggacag
aaaggtgaaccaggttatgatgggattccaggtgcagctggtgccaagggtgaacaaggt
attccaggtagaggaattccaggatttcccggtgcaaagggagataaaggtgcgaaaggt
gatgtgggttttccaggatccccaggaagtccggggatcccaggcctgaaaggagaacca
ggatatgctggtccaccaggtcctaagggaagccaaggtcttcctgggctaccaggaagt
gcaattgagggccctaaaggagacagaggaccccaaggccaacctggtcttccaggttta
ccaggtccaacagggccaccaggacccccaggactgaaaggggccaaaggagagcagggg
agcaatggttggcctgggactcctggcagtccaggagtcaaaggtgatccaggtttccag
ggactgccaggtagtcctggttcaccaggagatactggtcctaagggtgatctgggacct
ccaggagttccaggtattccaggtccaaaaggatctcctggcttcccaggccttaagggt
gagcgaggtgaccaaggtcttcctggatctaaaggtttacaaggcccaccaggcccacca
ggtgcttttcagcttgttaaaggggatcctggcttacctggccctgtaggaccagttggt
ctcaaaggtttcccaggacttccaggtcccaaaggacagcaaggggtgacaggaccttca
ggtgtacctggaccacctggtagtccagggtttgatggtaaacctgggcaaaaaggagaa
gctggtccttatggtcccccagggcccagaggattccctggtccacctggccctgaaggt
ttgcctggggctatgggcccaccaggtgcaccatctgttgctcatggcttccttgttact
agacacagtcaaaccaccgaagaaccatcgtgtccatttggaacaaggctgatttaccat
ggctactccttactttatgtacaagggaatgaaagagcacatggccaagatctgggcaca
gcaggaagctgtcttcgtaaatttagtaccatgcctttcttattctgcaatatcaacaac
gtatgtaactttgcatcgaggaatgactattcctactggctgtccactcctgaacccatg
ccgatgagtatggctccgatcactggtgataatattagaccattcatcagcagatgctct
gtgtgtgaagctcctgctatggtaatagctgttcacagtcaaacaattcaaataccaccg
tgtcctgaaggctggagttcactttggattggttactcctttgtcatgcacaccagtgct
ggtgcggagggctctggccaagccctggcgtctcctggttcctgcctagaggagtttcga
agcgctcccttcattgaatgccatggccggggcacctgcaattattatgcaaatgcttac
agcttctggcttgccactatagagaggaacgagatgttcaagaaaccgactccctcaact
ttgaaagcaggggatctgcgctccaatgttagccgttgtcaagtctgtatgagaaaaaca
taa
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