Falco cherrug (Saker falcon): 102046846
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Entry
102046846 CDS
T02911
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03440
Homologous recombination
fch03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102046846 (PALB2)
03460 Fanconi anemia pathway
102046846 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fch03400
]
102046846 (PALB2)
DNA repair and recombination proteins [BR:
fch03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102046846 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102046846 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
PP-binding
Motif
Other DBs
NCBI-GeneID:
102046846
NCBI-ProteinID:
XP_027667505
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
FFTGSRDKVSPSADEHETPQLQTNACFDLVTEEKTSVTSKHVPEFSNNEVSQQDSLQAES
IRASQENLCCGIIRTAPEEKKTQTSRHLMKLRRRTKAPVSEERESVRDVHLSNADETAKN
QIASPEELRSPVFRRSSLSNTEENDQRASRPAQGEESSFTPPNAVFGVVQDMLEDGVPPG
EPELFPCALRDSSNVWQPESLCAVATSDNHEPARLCSENSDSFSLDTSGDGGKESSSIMK
QTDSASMCEDQGELHRLLDLMSENEVLPADGNNSITNDSKSCEGNQSHANSLNPFPTDLT
LSNVEELLENQQVEIQSRLSHLEKVTAPESALNSCTVVEGLLFPVEYYVRTTRRMSNCQR
KVDLDAVILSQLGRSKKGQRRKCKQKDANSGQSSQERAENHLESGIMLFPFLGAENDSAN
SSSPQKSLPASNGSSTSLGSISQSSITSTKQDQRQTQRKEKEKKGRRKSTCKPLVHHVSQ
ELTESLDLVTTKEGCLLSNECQSENINSDANLEKSSDEGRLSAAAALALGEPEASAAIQP
TSADPPPAGSQVLGKCRKALLEQVQNPLQNSDSLNPGIETFASRIGDVEVNLTVCQADRQ
ALEHVKNPHMQGACKAEQLLAINVPPCRCLRSSAGQSTSQVSKDANKRGRRYPTGSESPA
SLGLPATDSDTCGSLFSFRSLQWLAPQLGVRDFDLPDEEFGLLKLEKLESSPMNDLEVFV
PSVFGDGVASEDTQDAQTNPEGKCLKSNLILTFKNGLPELPHIERPDSKKAISTHELLLT
PMGAVLAGAPTQPESQISSSVFPVVGATPAVLPPVLDKVFPSAPSVPPSQTSLHSSKGAP
AQVVDDGECKDSAVPLHLHSCGAGSARKEEEGTAFPLEAERGAGNKSDDAVTLEKHQQSE
SKEQRTSEQKVDVAVQLTPLLLDGLTEENLQLVSKLKDSSTSCAVDVSTVWWEAAGCREL
CVVTACESSVSLWKPLASDRWGKVYTWQLREIPVIQLVPLPDTCNLVCIALGDLEIGEIR
LLLYSSENDSFKQSLVKTGNIKAVLGLKDRRLVSSSRTLQEQQVEIVSLSETGRSKDGQT
LMPPEESVLAFAEVEGMRDALVGTTAVNSIVVWNLKTGQLLKKMHVGYSYPASICHRVYS
DSGLLFVVLSHPHAKESESCGNPAFRVIAFNPKTSRSTGVMFSSLPPGHTGRYLEGDVKA
ESHFMKDLGLDSLDQVEIIMAMEDEFGNS
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
ttcttcacaggttctagagataaggtatctcctagtgctgacgaacatgaaaccccccag
ttacagactaatgcctgctttgatcttgtcacagaggagaaaacatctgtcacatctaaa
catgttccagagttctccaacaatgaggttagccagcaggacagcttgcaggcagaaagc
atacgggctagccaggaaaacctgtgttgtggaatcattaggactgcccctgaggagaaa
aaaacccaaacctccagacacttgatgaagctgaggagacggacgaaggctccggtatca
gaggaaagggaatcggtgcgtgacgtgcatctcagcaatgctgatgaaacagcaaaaaat
caaattgccagtccagaggagctccggtcacctgtcttcaggcgaagcagtctctcaaac
actgaggaaaacgatcaaagagcatccaggccagcacagggagaagaaagcagtttcact
cctcccaatgcagtgtttggagttgtacaagacatgcttgaagacggtgtccctccagga
gaacctgagctgttcccttgtgcactgagggacagcagcaatgtctggcagcctgagtcc
ctgtgtgctgtggccacatctgacaaccatgagcctgcacggctatgttcagagaacagt
gactctttttcacttgacactagtggtgatggaggaaaagaatcctccagtataatgaaa
caaacggacagtgcaagtatgtgtgaagaccagggagaattacataggctcttggattta
atgtcagaaaatgaagtattgcctgctgatggaaataatagtataactaatgacagcaaa
agctgtgaaggaaatcaaagtcatgcaaatagtttaaatccctttcctacagatcttact
ctgagcaatgttgaagaattgttggagaatcaacaggttgaaattcagtcaagactttct
catctagaaaaggtgacagctcctgaaagtgcactgaactcgtgcacagtggttgaaggg
cttctctttccggttgaatactatgtcaggacaactcgacgcatgtctaattgccagagg
aaagtggaccttgatgctgtaattctcagccagctgggcagaagcaagaagggtcagcga
aggaagtgcaagcagaaagatgcaaattccggtcagtcctcccaagaaagagctgaaaat
catttggagtcggggatcatgctgttcccttttcttggtgcagaaaatgattcagcaaat
tcaagtagtcctcagaaatctcttcctgcgtccaatggtagcagcacttcacttggatca
atttctcaaagcagtatcaccagcacaaagcaagatcagagacaaacacagaggaaagaa
aaagagaaaaagggaagaagaaagtctacctgcaaaccccttgtccatcacgtgtcacag
gaacttacagagagtttggatcttgtaacaacgaaggaaggttgtctgctatcaaatgag
tgtcagagtgaaaacataaactctgatgctaatcttgaaaaatcgtcagacgagggaagg
ttgtctgctgctgcagctctggcgttgggagagccagaagcgagtgctgctatacagcca
acgagtgccgatcctcctcctgcaggaagccaagtgcttggcaaatgccgtaaggctctg
ttggaacaggttcaaaatccgcttcagaacagtgattctctgaacccagggattgaaacg
tttgccagccgtataggagatgtggaagtcaatttaactgtgtgtcaggctgacagacag
gcactggagcatgttaagaatccgcacatgcaaggagcctgcaaggctgagcagctccta
gcgattaatgtccctccgtgccgctgcctgcgttcctctgccggacagagcaccagtcaa
gtctcaaaagatgcgaacaaaagaggacgtaggtatccaacaggttctgagagtcctgct
tctcttggcttgcctgctacagactccgacacttgcggctctctcttctccttccgcagt
ctccagtggctggcccctcagctgggtgtcagagactttgacttaccagatgaggaattt
gggctactaaaacttgagaaattagaatcttcccctatgaacgacttggaagtttttgtt
cctagtgtgtttggagatggtgtggcttcagaggacacacaagatgcacagacgaatcca
gaaggaaaatgtctcaaaagtaatttgattttgacattcaaaaatggattgcccgagtta
cctcacatagaaaggccagattctaagaaggctatttccacccatgaattgttacttact
cccatgggggctgtcctagctggtgctcccactcagcctgagtctcagatttcctcatct
gttttccctgttgtgggtgcaaccccagctgttttaccaccagtactcgataaggtcttc
cccagcgcaccttctgtacctccttcacaaacgagcttgcattcctccaaaggagcacct
gcccaggtcgtggatgatggggaatgcaaagactctgctgtcccactgcatttgcacagc
tgtggtgcaggatctgctagaaaggaggaagaaggtacagcatttcctttagaagctgaa
agaggtgctggtaataaatctgatgatgctgtgaccttggagaagcatcagcagtcagaa
agcaaagagcagagaacttctgaacagaaagtagatgtagcagtacagttgactccacta
ctgcttgatggcctgacagaagagaacttgcagcttgtatcaaagctaaaggattcttca
acttcctgcgccgtggatgtgagtacggtgtggtgggaggcagctggctgcagagagctg
tgtgtggtgaccgcctgtgagagttctgtctccctgtggaaacctctggcgtctgaccgc
tggggaaaggtctatacttggcagctcagagagattcctgtaatacagctcgttcctctg
ccggacacctgtaatctcgtgtgtatagcattgggagatttggagattggagaaataagg
ctcttgctttattcttctgagaatgactcattcaagcaatctctagtaaaaactggaaat
ataaaagctgttcttgggctaaaggataggaggctggtcagcagcagcaggactctacaa
gagcagcaggtggaaatagtatcactttcggaaacaggaaggagcaaggacggacagact
ttgatgccccctgaagaaagtgttttagcttttgctgaagtggaaggaatgagagatgcc
ttggttggcaccactgcagtgaacagcattgttgtttggaatttgaaaacaggccagctt
ctgaagaagatgcacgttggttattcctacccagcttccatctgccatcgagtatattcc
gactctggccttctgtttgttgttttaagtcatccacatgccaaagagagtgagtcctgt
ggaaaccccgcattccgcgtgatagccttcaaccccaaaacatccaggagcacaggagtg
atgttctcctctctcccacccgggcacactggaaggtacctggagggtgatgtgaaggcc
gagtcccacttcatgaaggacctgggtttggacagtttggaccaagtggaaatcatcatg
gccatggaagatgaatttggtaattcatag
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