Falco cherrug (Saker falcon): 102047273
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Entry
102047273 CDS
T02911
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102047273 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fch03041
]
102047273 (DHX15)
03009 Ribosome biogenesis [BR:
fch03009
]
102047273 (DHX15)
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102047273 (DHX15)
Spliceosome [BR:
fch03041
]
Complex A
U2 snRNP components
U2 related factors
102047273 (DHX15)
Complex B
102047273 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102047273 (DHX15)
Ribosome biogenesis [BR:
fch03009
]
Eukaryotic type
90S particles
Helicases
102047273 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
102047273
NCBI-ProteinID:
XP_014132274
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MRPTSNSTYYAAAGLPTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTD
ILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADE
MDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLA
TDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPE
RDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPL
YSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYN
PRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLG
SVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLD
PQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLL
NVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN
IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIR
TCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctacatctaactctacatattatgcagctgctgggttaccaactataaaacca
gcaatgattccacacagtattaaccctttcacaaatctaccacatacaccacgatattat
gacatcctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacagat
attttgattaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaaca
cagatccctcaatggtgcgttgactacatgcgctcattgcctggaccaaaaaggggagtg
gcatgtactcagcctagaagagtagctgcaatgagtgtggcacagcgtgttgctgatgag
atggatgtcatgctgggccaggaggttggttactctattcgatttgaagactgcagtagt
gcaaaaaccattttgaagtacatgactgatggtatgttacttcgtgaagcaatgaatgat
cctttgctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggct
actgatattttgatgggagttttgaaggaagttgtaagacagagatctgatttgaaggtt
atagttatgagtgctactttagatgctggcaagtttcagatctattttgataactgtcct
ctcctaactatcccgggtcgcacccatcctgtggagatattctatactccagaaccagaa
agggactaccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagag
gaaggagatctcttactctttcttaccggacaggaggagattgatgaagcctgcaagagg
ataaaacgtgaaattgatgatttaggccctgaagttggtgacatcaaaatcattccattg
tattccacccttcctccgcagcaacagcaaaggatttttgaacctcccccaccaaaaaaa
caaaatggagccataggaagaaaggttgttgtgtccactaatattgctgagacttcatta
acaatagatggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtatacaat
cctcgtatcagagtggagtctctcttggtgactgcaattagtaaagcttctgctcagcag
cgagctggccgtgctggtcgtactagaccaggcaagtgcttcaggctttatacagagaag
gcttacaaaactgaaatgcaggacaacacataccctgaaattctgaggtctaacttagga
tctgtagtattgcagctcaagaagcttggtatagatgatttggtgcactttgattttatg
gatcctccagctcctgaaactctgatgagagccttagagcttttgaattaccttgctgct
ttaaatgatgatggagacttgactgagttgggatccatgatggctgaatttccactggac
ccacagctggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtccta
tctattactgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaa
gcagcagatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctg
aatgtctaccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttc
attaactacaggtccctgatgtctgcagacaacgtacgccaacagctgtcacgaatcatg
gatagatttaatttgcctcgtagaagcacagactttaccagccgagactattacatcaac
ataagaaaggcattagttactgggtatttcatgcaggtggcacatttggaacgaacaggg
cattacttaacagtgaaagataaccaggtggtgcagttgcatccctccactgtcctcgat
cataaaccagaatgggtgctctataatgagtttgtcctcacaacaaagaattacatccgg
acatgtacagacataaaaccagaatggctggtgaaaattgcccctcagtattatgacatg
agcaattttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcag
tccaaggaatactcacagtactga
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