Falco cherrug (Saker falcon): 102047367
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Entry
102047367 CDS
T02911
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X7
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102047367 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102047367 (PNLDC1)
Enzymes [BR:
fch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102047367 (PNLDC1)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102047367 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
102047367
NCBI-ProteinID:
XP_014138620
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MKIRTSMWYIHTTFFSFLQHGELRMLNLPSLHLAFSSCLIMALTIISVVNRDVLKKAIDE
VTCWVGAAEEEETLILQDLSGYQVFEVQLVLRQALQNVWTQPLGDKKVMVKKVSPQHRWL
LENSPYDSCRKELILLSARGFTNLFQTLVKAKKPLVGHNMLMDLMHLHDKFYKPLPESYE
EFKRNIHNLFPVLIDTKTVTKSVWKKHPFPRVSNLLEIYSVLCSRNLNSKDSACPVITPA
SDCSRYAEKKCPHEAGYDAFLCGSVLLKSAHLLLCGYTDDAVEVDSSFSRYLPVLAEYLN
KVNVIRGGVASINFSGEDAPCQRPPLLVVHVRGWSGLNERQIRQEFKAFCHFDVRRLSKD
QFLLLSNKFKHVRRVLRDANHPPRLGVSIYRHWRHSPSISCLLQVSGIVALWSLLAFVLG
GAPCCSF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgaacaagtatgtggtacattcatacaacttttttctctttccttcaacat
ggggagttacggatgttgaatttgccctctctgcatctagcattcagttcctgtctcatt
atggctttgactataataagtgttgtgaacagggatgtgctgaagaaagctattgatgaa
gtgacctgttgggtgggtgcagcagaggaagaggagactctgattctgcaggatctgagc
ggctatcaggtgtttgaagttcagctggttctgagacaagctctccaaaatgtttggaca
caacctcttggagacaagaaggtaatggtgaaaaaagtgagtccacagcatcgttggctt
ctggagaactctccttatgactcctgccggaaggagctcattctcctatctgcccggggc
ttcactaacctcttccagacacttgttaaagccaagaagcccctggtgggacataacatg
cttatggaccttatgcatcttcatgacaagttctacaagccccttccagaaagctatgag
gagtttaaaagaaacattcacaacctgtttcctgtcctcatagacaccaagactgtaaca
aaatctgtctggaagaagcatccatttcctcgagtatctaatcttttggagatatattca
gttttgtgtagcagaaacctgaattccaaagattcagcatgcccagtgataactcctgca
agtgactgctcaagatatgctgagaagaaatgtcctcatgaggcaggctatgatgcattt
ctctgtggttcagttcttctgaagtcggctcatttgctactgtgcggatacacagatgat
gcagtggaggttgattcttctttctctcgatatctccccgtgttagcagagtatctgaac
aaagtgaacgtcatccgaggtggtgttgctagcattaatttttctggggaagatgctccc
tgtcagcgtccgcctctcttggttgtccatgtccgaggctggtcagggctgaatgaaagg
cagattcgccaagagtttaaagcattttgtcactttgatgtgagacggctttcaaaggac
cagttccttcttctctccaataaatttaagcacgtcaggcgcgttctgcgagatgctaac
catccccctcgcctgggggtatccatctaccgccactggagacactctccgagcatcagc
tgcctgctgcaagtctctggtattgtggcactctggtctctcttggcctttgtactcgga
ggagctccctgctgttcattctaa
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