Falco cherrug (Saker falcon): 102048076
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Entry
102048076 CDS
T02911
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch04510
Focal adhesion
fch04512
ECM-receptor interaction
fch04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102048076 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102048076 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102048076 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fch04147
]
102048076 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
fch00536
]
102048076 (COL6A3)
Exosome [BR:
fch04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102048076 (COL6A3)
Glycosaminoglycan binding proteins [BR:
fch00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102048076 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
102048076 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Motif
Other DBs
NCBI-GeneID:
102048076
NCBI-ProteinID:
XP_027658758
LinkDB
All DBs
Position
Unknown
AA seq
2809 aa
AA seq
DB search
MRKHRHLPFVAMFCLLLSGFCLVRAQQQAVIEVNKKDIVFLIDGSTALGTGPFNSIRDFV
AKIVQRLEVGPDLIQVAVAQYADTVKPEFYFNTHQSRRDVMANVKRMKLMGGTALNTGSA
LDFVRSNFFTSAAGCRMEEGVLPMLVLITGGKSRDAVDQAAAEMKRNRIVILAIGSRNAD
LAELQEIAHERDFVFNPNDFRVQFMQAILPEVLSPIRTLSGGLIVQEPPSVQVTKRDIIF
LLDGSLNVGNANFPFVRDFVATLVNYLDVGSDKIRVGLVQFSDTPKTEFYLYSYQTKSDI
IQRLGQLRPKGGSVLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQV
SNELARAGVLTFAVGVRSADKAELEQIAFNPRMVYFMDDFSALTALPQELNKPITTYVSG
GVEEVPLAPTESKKDILFLIDGSANLLGSFPAVRDFVHKVISDLNVGPDATRVAVAQFSD
TIQVEFDFAELPSKQDMLLKVKRMKIKTGKQLNIGAALDEAIRRLFVKEAGSRIEEGVPQ
FLVLLVAGRSTDDAEQPSDALKQAGVVTFAIKAKNADSAELERIVYAPQFILNVDSLPRI
SELQPNIVNLLKTIQLQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVQRVVESLDIG
RDKVRVAVAQYSNVIQPEFLLDTHEDKADLISAIQELKVMGGSPLNTGAALDYLIKNVFT
VSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFL
PDFAISVPDFSQLDTVQQVVSNRVIRLTKKEIESLAPDLVFTSPSPAGVKRDVVFMVDGS
RYAAQEFYLIRDLIERIVNNLDVGFDTTRISVIQFSEHPHVEFLLNAHSTKDEVQSAVRR
LRPQGGQQVNVGEALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDLEYPSLQVKQ
VGVAPMVVAKNVEPEEMVQIALSPDYVFQVSSFQELPSLEQKLLTPIETLTGDQIRRLLG
DVQPPVDTSGDEKDVVFLIDSSDSVRPDGLAHIRDFISRIVQQLDVGPNKVRIGVVQFSN
NVFPEFYLKTHKSKNAVLQAIRRLRLRGGSPVNAGKALDYVVKNYFIKSAGSRIEDGVPQ
HLVVILGDRSQDDVNRPANVITSTSIKPLGVGARNVDRDQLQVITNDPERVLVVQDFTGL
PTLEKKVQSILEELPIPTTETPVYPGPGGKKQADIVFLLDGSINLGRDNFQEVLQFVYSV
VDAIYRDGDSIQVGLAQYNSDVTDEFFLKDYSTKPQILDAINKVIYKGGRVANTGTAIRH
IQANHFVKEAGSRIDQRVPQIAFIVTGGKSSDDGPSASSEIAQKGVKVFAVGVKNIDLKE
VSRLASESATSFRASTAQELSELNEQVLVTLEAAMEEKLCLGPTDVMRDCDLDVILGFDV
TDVGPGQNIFSSQRGLESRVESVLNRITQMQKISCTGNQAPNVRVAIMAQARGGPVEGLD
FSEYQPELFEKFQGMRSRGPYFLTADTLRSYLKKFRSASPSSTKVIIHFTDGADDSIDQL
EAASSALHTEGVNALIFIGLDRVSNFDRVMKLEFGRGFTYNRPLRVNLLDLDFELAEQLD
NIAERTCCKVPCKCSGQRGDRGVPGPIGPKGATGDLGYGGYPGDEGGPGERGPPGVNGTQ
GFQGCPGHRGTKGSRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGYSGRRGDKGIK
GERGERGDRGLRGDPGDSGADNTQRGSRGPKGEIGPMGEPGLVGLDGQDGGVGRKGMTGR
RGQIGIKGTKGSVGQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGPRAGSGSPGTPGE
RGRIGPMGRKGEPGNPGSKGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFIGYPGPK
GGPGDRGGAGGPGPKGNRGRRGNAGGPGTPGQKGEVGYPGPSGLKGDKGESRDQCALVRN
IKDKCPCCYGPKECPVFPTELAFAIDTSSGVVRDVFNRMKQTVLRVVNNLTIAESNCPRG
ARVALVTYNNEVTTEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRA
RSGFLMRKVAVFFSNGDTRASSQLNDAVLKLYDAGVMPVFLTSRPDPVLTRALEINNTAV
GHAIVLPTSGSQLNETIRRLLTCHICLDVCDPDLTCGLGSQRPVFRDRRAAPTDVDTDIA
FIMDSSESTTPLQFSEMKKYISYLVSNLEISSEPKVSQHHARVAVLQQAPYEYETNSSFP
PVKTEFSLTDYGSKQKIINYLHNQMTQLHGTRATGSAIEHTIAHIFESAPNPRDLKVIVL
MITGKVNKQELENLQKVVTNAKCKGYFFVVLGIGRKVNAKNIYSLASEPNDVFFKLVDKP
GELHEEPLLRFGRLLPSFIRSDFAFHLSPEIKKQCEWFQSNQQAKNQSPGHTGHKAVYVA
PNVTISQTLSASTTVTASTKPVASTSAQARTTTASTTAQTRATNQTTSSTVVQLNTTTQS
TASITAHAKATSRTTANTTASGAGGRRRQAKTHDIQITDVTENSARLRWASPEPHNAYTF
DITVTLAHDQSLVQKQNMTGTEHTIRGLRSGQKYVVVITGYQKSQPKVTYTGTFTTKTLA
QPKVSLANMMLNTEPLEGPNSDWPDPCLLDFDMGMQCKDYQIVWFFDYKNKICSQGWYGG
CGGNANRFEAEAECISKCLKPSAAEKAMQQPPLEKKLSSVMDICQLQKDEGTCRNFVLKW
YYDPETKSCARFWYGGCGGNENRFNTQKECEKVCVSGNINPGVLTTIGT
NT seq
8430 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgccttttgtggcaatgttttgcctcctactctcaggcttt
tgcttggttcgcgcccagcagcaagcagttattgaagtgaacaagaaggatatagtcttc
ctgatagatggctcaactgctttggggactggcccctttaactcgattcgtgattttgtt
gccaaaattgtccaaaggctggaggttggacctgacctgattcaagtggcggtggcacag
tacgcagacactgtgaagccagagttttattttaacacccaccagagcagaagggatgtg
atggctaacgtgaagagaatgaagctcatgggtggtacggcgctcaacactggctcggca
ctggactttgtgaggagcaacttcttcaccagcgctgctgggtgcaggatggaggaaggg
gtgctccccatgctggtgctcatcactggtggtaagtccagggatgccgttgaccaagct
gcggcagagatgaaaaggaaccggatagtgatccttgccattgggtcgagaaatgccgac
ctggcagaacttcaagaaatagcccatgagagagattttgtgttcaacccaaatgacttc
cgtgtccagttcatgcaagccattcttcctgaagtgctgtcacctatccggacactctct
ggaggactgattgtccaagaaccaccatcagttcaagtaaccaaaagggatatcatcttt
cttttggatggatcactcaacgtcggaaatgccaacttcccctttgtccgtgactttgtt
gccaccctagttaactaccttgatgtcggcagtgacaaaatccgagttggcttagtgcaa
tttagtgacactcctaaaacagagttctatctgtactcgtaccaaaccaaatcagacata
attcaacgtttggggcagctgaggcccaagggggggtcagtgctgaacactggctctgca
ctgaactttgtgctttcaaatcacttcacggaagctggtgggagcagaataaatgaacaa
gtgccgcaggtcctagtcctggtgacggcagggaggtctgccgatcccttcttgcaagtt
tccaatgaattagctcgggctggagtgctgacttttgctgttggagttaggagtgcggat
aaggcagaacttgaacagattgcctttaatccaagaatggtatattttatggatgatttc
agtgctctgacagctttaccccaggagttaaataagcctataaccacatatgttagtgga
ggtgtggaagaggttccactcgccccaacagaaagcaagaaagatattttattcctgatt
gatggctcagctaacctcttgggtagctttcctgctgtccgggactttgtacacaaagtc
atttctgacctgaacgtgggtcccgatgccacacgagtagctgtagctcagttcagtgac
accatccaagttgaatttgactttgctgaactgccgtctaagcaagacatgctcctcaaa
gtgaaaaggatgaagataaaaaccgggaagcaactgaacattggagctgcactagatgaa
gctataaggaggttgtttgtgaaggaagctggaagcaggatcgaagaaggcgttcctcag
tttttggtcctccttgttgctgggagatcaacggatgatgcggagcaaccctcagatgct
ctgaagcaagctggagttgtgacctttgctatcaaagcaaaaaatgctgactctgcagag
ctggaaaggatcgtttacgccccacaattcattctgaacgtcgactccctccctcggatt
tcagagcttcagccaaacatagtcaacctgttgaaaactatccagcttcagccaacagta
gttgagagaggtgagaagaaggatgtagtgtttctaatcgatggctcggatggtgtcaga
agaggcttcccactactgaagacctttgtccaaagagttgttgaaagcctggatatcggt
cgtgacaaggtccgtgtcgccgtcgcacagtacagcaatgtcatacaacccgagttctta
ctcgacacccatgaagacaaagcagatctcatcagcgccatccaggagctgaaggttatg
ggaggatctcctctgaacactggagcagccctcgactatctcatcaagaatgtgttcacg
gtgtctagcggcagcaggatagcggaaggtgtcccgcagttcctgattctgctgaccgct
gaccggtcccaggatgatgtgaggaggccctcagtggtcctgaagacgagtggcactgtg
ccctttggcattgggattgggaatgctgacctcacagagctgcagacgatctccttcctc
ccagattttgctatctctgtgcctgacttcagccagctggatacagtgcagcaggtcgtc
tcgaacagagtcatccggctgaccaagaaagagatagagtcacttgcccctgatctggtt
tttacatcacccagcccagcgggtgtgaagagggacgtcgtgttcatggttgatggctcc
cgctatgccgcccaggagttctacctcatccgtgatctcattgagaggatagtgaacaac
ttggatgtgggctttgacaccaccaggatttcggtgatccaattcagtgagcatccccac
gtggagttcctgctcaatgcccactccaccaaggatgaggtgcagagtgccgtgagacgg
ctgcggccacagggtggccagcaggtgaacgtgggggaggcccttgagtttgtggcaaag
accatcttcacccgaccctctgggagccgcatagaggaaggtgtccctcagtttttggtc
atcctttcctcccgcaagtccgatgatgacttagagtatccatcactccaagtcaaacaa
gtgggggtggcacctatggtggtagcaaagaatgtggagcctgaggagatggtgcagatt
gctcttagtcctgattatgtattccaagtctccagcttccaggaactgcccagcctcgag
cagaagctgctgactcctattgaaaccctgactggggaccaaatcagacggctgctggga
gatgtgcaaccccccgtagatacttctggtgatgaaaaggatgtagtcttcctcattgac
agctccgacagcgttagacccgatgggcttgctcacattcgggatttcatcagcagaatt
gtccagcagctggatgttgggccaaacaaagtgcgaatcggcgtggtgcagttcagcaat
aacgtcttccctgagttctacctgaagacccacaagtccaaaaacgctgtcctgcaagcc
atccgccgcttgaggcttagagggggttcccccgtgaatgctggcaaagccctagactac
gtggtgaagaactactttatcaagtctgcagggagcaggatagaagatggagtgccccaa
cacctagtcgtcattcttggagaccgctcccaggatgatgtgaacaggcctgctaatgtg
atcacttcaacaagcattaaacccctgggtgtcggagccagaaacgtggacagggaccag
ctgcaggtcatcaccaatgatcccgaacgtgtgcttgtggtacaagacttcacaggactc
ccgactttagaaaagaaggtgcagagtattcttgaagagcttccgataccaacaacagaa
acccctgtatacccaggacctggaggtaaaaagcaggctgacattgtgtttttgctggat
ggctccatcaatctggggagagataacttccaagaagttcttcagtttgtctactctgtg
gtggatgccatttatagagatggtgactctatccaggtaggactggcccagtacaactca
gatgtcaccgatgagtttttcctcaaggactactccaccaaacctcagattttagatgcc
atcaacaaagtcatctacaaaggcggccgcgtggccaacactggcacagctattaggcat
atccaggcaaaccactttgtgaaagaggccggcagccgaatcgaccagagggtgccccag
atcgccttcatcgtcacgggtgggaagtcctcagatgacgggccgagcgcctcctcagaa
atcgcccagaaaggcgtcaaggtattcgcagttggcgtgaagaacatcgacctgaaggaa
gtcagcaggctggccagcgagagtgctacgagtttcagagcgtccacagcccaggagctg
tctgagctgaatgagcaggtcctggttacgctggaggctgctatggaggagaaattgtgc
ctgggaccaacagatgttatgagagattgtgacttagatgtgatacttggctttgatgtc
accgatgttgggcccggccaaaatatattcagttcccagagaggtctggagtccagagtc
gagtccgtgctgaacagaataacacagatgcagaagatcagctgcactggcaaccaggcg
cccaacgtcagggtagccatcatggcccaggctcggggcggacccgtggagggactggac
ttctcagagtaccagcctgagctcttcgagaagtttcagggcatgcgctcccgagggccc
tatttcctcacggcagatactctgaggtcctacttgaaaaaattcagatccgcgtccccc
agcagcaccaaggtcataatccattttactgatggtgcagatgactcaatagatcagctg
gaggctgcttcatctgctttgcatacagaaggtgtcaacgctctcatcttcattgggctg
gaccgagtgagcaattttgacagagtgatgaagctggagtttggtcgtgggttcacctac
aacagaccactcagagttaatctgctggacttggatttcgagctggcagagcagctcgac
aacatcgcagagaggacatgctgcaaggtgccatgcaagtgctcggggcagagaggggac
agaggtgtgccaggccccataggaccaaagggtgccacaggtgatcttggctatggaggt
tatcctggtgatgaaggaggaccgggcgaacgtggaccaccaggtgtgaacgggacacag
ggtttccagggatgccctgggcacagaggaaccaagggttctcggggattcccaggagaa
aagggtgaactgggagaaatgggtctggatggcattgatggagaagagggagacaagggc
ttgcctggctcctctggagagaagggatactctggcaggaggggtgataagggaattaaa
ggcgaacgaggagaacgaggtgaccgtgggctccgcggagacccgggagattcaggagct
gataatactcaacggggatccagaggcccaaagggtgaaattggaccaatgggagagcca
ggactggtggggctggatggccaagacggtggagttggaaggaagggtatgacaggacga
aggggacagataggaattaagggtaccaagggctcggtcggtcagccagggccagctgga
gaacaaggcatgagagggccacagggtccacccggccagattggcacaccaggcataaga
ggagagcagggcattcctggacccagggctggtagtggatcaccaggaaccccaggagag
cggggcaggattggtcccatggggcgaaagggtgagcctggaaaccccggatccaaaggg
ccaaatggacagcagggcccacgaggagagatgggtgatgatggacgagatggaattggt
ggcccaggtcctaaaggcagaaagggagaacgtggcttcataggctaccccgggcccaag
ggtggacctggtgaccgcggtggtgctggaggtcctggccctaaaggaaacagaggccgc
agaggaaatgcaggaggtcctgggacacctggtcagaaaggagaggttggataccccgga
ccatctggacttaaaggtgataaaggagaatccagagatcaatgtgcgcttgtgcggaac
atcaaagacaaatgcccttgctgctacggtcccaaggagtgccctgtctttccgactgag
ctggccttcgctattgacacctcctcaggcgtcgtgagggatgttttcaacaggatgaag
caaactgtgctcagagtggtcaacaacttaaccatcgctgagagcaactgtcctcggggt
gcccgggtggctctggtcacctacaacaacgaggtcaccacagagatccgctttgctgat
gccaggaagaaatcaagcctcctccagcagatccaaaacttccaggcaaccctgaccacg
aagccacgcagcctggagactgccatgtcctttgtggccaggaataccttcaagcgtgcc
cgaagcggtttccttatgaggaaggtggctgtctttttcagcaacggggacacgagagcc
tcctcgcagctcaacgacgctgtgctgaaactctacgatgctggggtcatgcccgtgttc
ctcaccagcaggccagacccggttctcaccagagctctggagatcaacaacacagcggtt
ggacacgcaattgttcttccaaccagcggcagtcagctgaacgaaactatccggaggctc
ttgacttgtcacatttgtctggatgtgtgtgaccctgatctcacctgtggccttggtagt
cagagacctgtattcagagacagaagggcagccccaacagatgtagacactgacatagcc
ttcatcatggacagctcagagtccaccacccctctgcagttcagtgagatgaagaagtac
atttcctacctcgtcagtaacctggaaatcagctctgagccaaaagtatctcagcaccac
gcgagagtggcagttctccagcaagctccttatgaatacgaaaccaactcaagcttccca
ccagtaaaaactgagttttcactaactgattatggatccaaacagaagatcattaattac
cttcacaaccaaatgacccagctccacggcacaagggctacgggaagtgccattgaacac
acaatagctcatatttttgaaagtgcaccaaaccctcgggatctaaaagtcatagttttg
atgataactggaaaagtgaataaacaagaacttgagaacctgcagaaggttgttaccaat
gcaaaatgcaaagggtacttctttgttgttttgggcattggtaggaaggtgaatgccaag
aatatctatagcttagctagtgagccaaatgatgtgttcttcaaattggttgataaacca
ggagagcttcatgaagagcccttgctacgctttgggagactgctgccatcctttatcaga
agcgactttgctttccacctgtctccagagataaagaaacagtgcgagtggttccagagc
aaccagcaagccaagaatcagagccccgggcacaccggacacaaagcagtgtatgtggca
cccaatgtgaccataagccagaccctcagtgccagcaccacagtcactgcgagcaccaag
cctgttgcaagcactagtgcccaagccaggaccaccactgccagcaccacagcccagacc
agagccaccaaccagaccacatccagcaccgtggtccagctgaacaccaccacgcagagc
acagcaagcatcactgcccatgccaaagccaccagccgcaccaccgcgaacaccacggct
agcggggcaggcggcaggagaagacaagcaaagacccacgacatccagatcacagatgtc
actgagaacagtgccaggctgcgctgggccagccccgagccacacaacgcctacactttt
gatatcaccgtcaccttagcgcatgaccagtctctcgtgcagaagcagaacatgactggc
actgagcacaccatccgaggactcagaagtgggcagaaatacgttgtcgtcattaccggc
taccagaaatcccaacccaaagtaacctacacagggacattcaccacaaagaccctggca
cagcccaaggtgtccctggccaacatgatgctcaacaccgagccgctagaagggcccaac
agtgattggccagacccttgcttgctggactttgacatgggcatgcagtgcaaggactat
cagattgtgtggttctttgactacaaaaacaagatctgcagccagggttggtatggtggc
tgcggtggtaatgccaatagatttgaggccgaagctgagtgcattagcaaatgcttaaaa
ccatcagcagctgagaaagccatgcagcagccaccccttgagaaaaaattatcatcagtc
atggatatctgccagctgcaaaaagacgaggggacctgcaggaactttgtgctaaaatgg
tactacgaccctgagaccaagagctgtgcccggttctggtatggtggctgtggaggcaac
gagaacagatttaacacgcagaaagaatgtgaaaaagtttgcgtgtctggtaatatcaac
cctggcgtgttgacaacgataggaacatag
DBGET
integrated database retrieval system
