Falco cherrug (Saker falcon): 102050171
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Entry
102050171 CDS
T02911
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102050171 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fch01001
]
102050171 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
fch04054
]
102050171 (CIITA)
Enzymes [BR:
fch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102050171 (CIITA)
Protein kinases [BR:
fch01001
]
Serine/threonine kinases: Other
TAF1 family
102050171 (CIITA)
Pattern recognition receptors [BR:
fch04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102050171 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_9
LRR_8
LRR_14
NB-ARC
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
102050171
NCBI-ProteinID:
XP_027664418
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MLKNVISKEYHQALLHEKDREDLARKISLTFVEKWDLYLSTSVPLCCLNLCSSKPLNMID
NEPAGSKYISDSKRQIMDSAFLPENSYLDLLHSDIDPLHLYTLFDPKSSGNEEGDFSADP
EADASNCDQFNNMDFLYTMENGENGDELYICSNTIEAYARIAELAEYVLKDQQEKQVEDT
FAGNLILDEMAAENTERFPDTKMQKCHKRSFLSSSESCSDASQPKYKKMVEVPAVSAGNG
SFLPMPLNSHPASSTSLTNQHTSFSVPATNVLERSSDIPGSSAPLIPDCLPVGVKGSQEN
RGFADPPQQILNFLLGNGTSDVILYPVLTSYTETLIPPSFPVSLCGLQMFKEVQIPIIPS
EEPFKRPKPVEAFCTSLMDYFRDVCKSVAMEREVTLDHLFIDGTLVQSQTETKTGKNSEK
AMEKELVTCSLQGKEKAVLKRSQIFQIPRGKDLETKVIVVLGKAGMGKSILVQKICQDWS
NGEFSQFEFVFWFDCKQISFPEKRYSLKDLLLEFFVKPQEGNEEIFEYILQNPAKVLLIF
DGFEGLHDHENSPRCLASQPEKHLCTIKELLSGLIQKKTLNGCTLLLTARPKDKVYQYVS
KVDKAIEIVGFSPQQRELYISKYFEGLPYCDNALKLIKECEYLFSYCYSPVMCRFVCFIC
ETVLEMGNESLPSTLTAVFLKFVQQKIIPMQTDVTAIQNQESLATLARIAWYLGEKRQSA
MKSDHPSKEVKEFALKYGFFLPFAFPRHSDSGEQEFGSTFSDFVIQNFLGALHLMLAEDI
KDKSLTKYLSLASKKKKPYNWLDLVPRFLAGLLFLQDDSYFCSRSNKDVKLSTKKQKPLL
KYIRRLQINELCPERLLELLHCIYETQSNYLLQHVALRLKPDLSFLGVVLAPPDVHVLHS
ILKRSRKEFFLDLQNSSIDMQGLKDLVGLKNVASFRASLSDTVRLWKSLEQAKDYELLRA
STEKFILDPFKAKTMKDISDLSDLVKMQEKMINCVQDASGCSSCGIPAIKNLKKIEFALG
PVCGLQGFLKLVKILAAFPLLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQN
KITDVGAEKLATALPSLSSLKTLSLYNNSICDFGAENLAKVLPAMASLRVLDVQYNKITG
VGAQQLTDSLRKCPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaatgtgatatccaaggagtaccatcaagccttgctccatgaaaaagacaga
gaggaccttgcaaggaagatatctctgacatttgtagaaaaatgggacctgtacttgagc
acttcagttcccctctgttgtttaaacctctgcagcagtaagcctctaaacatgatagat
aatgagccagcaggaagcaagtacatctcagacagcaagagacaaatcatggattcagca
tttctgcctgaaaacagctatcttgatttactgcacagtgatatcgacccattgcatctg
tatactctctttgatcctaagtcatctggaaatgaagaaggtgacttctctgcagatcct
gaagctgatgccagcaactgtgatcagttcaataatatggatttcctttatacgatggaa
aatggtgaaaatggggatgaactgtatatctgttccaacaccatagaagcttatgctaga
atagctgaattagcagaatatgtgctcaaagatcagcaggagaagcaggtggaagacact
tttgcagggaaccttattttggatgaaatggctgctgaaaacactgagaggtttcctgac
acaaagatgcagaaatgtcacaaacgttcattcttaagctcttcagagagttgctctgat
gcttcacaacccaaatacaagaaaatggtggaagtccctgcagtgtctgcagggaatggc
agtttcttacctatgcctctcaacagccatccagctagctccacctcactcactaaccag
cacacatccttttctgttcctgctaccaatgtgttggaaagaagttctgacattcctgga
tcttcagcacctttgattccggattgtctacccgtcggcgtgaaggggagccaagagaat
agaggctttgcagatcctcctcagcagatacttaactttcttcttggaaatggcacatca
gatgttatattatatccagtgctgacttcttacacagaaacgttgatacccccaagtttt
ccagtcagtttatgtggtttacaaatgttcaaagaagtccagattcccataattccttct
gaagaacctttcaaaagaccgaagccagtggaagctttctgtacatcacttatggattat
ttccgagatgtgtgcaaatctgtggccatggagcgtgaagtaactcttgatcacctgttt
attgatgggacacttgttcaaagccaaactgaaaccaagactgggaagaatagtgaaaaa
gccatggaaaaggagctggtaacttgcagtctgcaagggaaggagaaggcagtccttaaa
agaagccaaatatttcaaatccccagaggtaaagacttagagactaaagtgattgtggtg
ctgggaaaagcaggaatgggcaaaagcattcttgttcagaagatctgccaggactggtcc
aatggagagttttctcagtttgaatttgtattttggtttgactgcaaacaaataagcttt
cctgagaaacgatatagcctgaaggatctgcttcttgaattttttgtaaaacctcaggag
ggaaatgaagagatctttgagtatatattgcaaaatcctgctaaagtccttctgattttt
gatggttttgaaggcttgcatgatcatgaaaattctcctcgttgcttggccagtcagcct
gaaaaacacttgtgcactataaaggagctgctttcaggactcatacaaaagaagacactc
aatggttgcactttactacttacagcaagaccaaaagacaaggtgtaccagtatgtgtca
aaagtggataaggctattgaaatagtaggattttcccctcagcagagagagttgtacata
tccaaatactttgaaggattaccctactgtgataatgccctgaaattaatcaaagagtgt
gagtacctgttcagttattgttacagccctgttatgtgtagatttgtttgttttatctgt
gagacagtacttgaaatgggaaacgaaagccttccttcaactcttactgcagtcttcctg
aaatttgttcagcaaaagataatacctatgcaaacagatgttacagccatacagaatcaa
gagagtcttgctacactagcccgtatagcctggtatcttggagaaaagcgccaaagtgcc
atgaaaagtgatcatccttctaaggaagtgaaagagtttgctctgaagtatggatttttc
ctgccttttgcattccccagacattcagatagtggagaacaggaatttgggagcacattc
tctgactttgtcattcagaatttcttgggtgcacttcaccttatgttagcagaagacatc
aaggataaaagtctaacaaagtacctgtctcttgcatccaagaagaaaaaaccttataac
tggttagatttagtgcctcgatttttggctggattgttgttcctccaggatgactcctac
ttctgctcccgttcaaataaggatgtaaaactatcaaccaagaagcaaaaaccactgttg
aaatatattagaaggctgcagataaatgagctctgcccagagaggttactcgaacttttg
cattgtatttatgaaacacaaagcaattatcttttgcagcatgtggccttaaggctcaag
ccagacctgtcttttctgggtgtagttcttgcaccacccgatgtccatgtactgcactct
attttaaaaaggtcaagaaaagagtttttcttggatttgcaaaacagcagcattgacatg
caagggctaaaagacttggttggcctaaagaatgtggcatctttcagggcctccctcagt
gatacagtcaggctctggaaatctttagaacaggcaaaagactacgaactgctgagagca
tcaacagagaaattcattcttgatccctttaaggcaaagacgatgaaggacatcagtgat
ctttcagaccttgtaaagatgcaggagaagatgatcaattgtgtgcaagatgcatctggt
tgcagcagctgtggaattcctgccatcaaaaacctcaaaaaaatagaatttgcgctgggt
ccagtatgtggccttcagggattcctaaaacttgtgaaaattcttgcagcatttccattg
cttcagcatttagatcttgatgctctgagtgaaaatggcataggagatgaaggagcaaag
agcctatctgaagtctttccaaccctgacatcactggaaacattaaacttatcacagaat
aagataacagatgtgggtgcagagaaactagctaccgctttgccttctttgtcttcatta
aagacactaagcttatacaataacagcatttgtgattttggagcagaaaatcttgcaaaa
gttcttcctgcgatggcatctttaagagtgctagatgttcagtataacaaaataactggt
gttggagcccagcagctgactgacagcctacgaaaatgtccccatataaaaaacttggtg
atgtggaatcccaccattccctatggagttctcgaacaccttcagcagctggactctagg
atcagcgtgtag
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integrated database retrieval system
