Falco cherrug (Saker falcon): 102050765
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Entry
102050765 CDS
T02911
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
fch
Falco cherrug (Saker falcon)
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fch03009
]
102050765 (IGHMBP2)
03012 Translation factors [BR:
fch03012
]
102050765 (IGHMBP2)
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102050765 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
102050765 (IGHMBP2)
Ribosome biogenesis [BR:
fch03009
]
Eukaryotic type
Other ribosome biogenesis factors
102050765 (IGHMBP2)
Translation factors [BR:
fch03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102050765 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
Helicase_RecD
ResIII
Viral_helicase1
zf-AN1
nSTAND3
DEAD
SLFN-g3_helicase
Flavi_DEAD
AAA_16
AAA_22
UvrD-helicase
AAA_25
AAA
IstB_IS21
ABC_tran
RL
DnaB_C
DAP3
T2SSE
NTPase_1
UvrD_C_2
PhoH
cobW
Motif
Other DBs
NCBI-GeneID:
102050765
NCBI-ProteinID:
XP_005445124
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MAAEAAERHLELLREEREAELAESRAWQESISLKELQRRGVCLLKLQAASQRTGLYGRLL
VTFQPRKYDSDAELPYNSFGPGDIVGLYDSAGHNDPLSTGIVTRITSKAVTVAFEESRDG
MLSLDRECSYRLLKLANDVTYNRLKKALNALKQYHSGPASNLIDVLFFSSDPSTFNETKP
LKLYNDSLDASQREAVSFSLAQRELAIIHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPS
NVAVDNLVERLAGCKARILRLGHPARLLEPIQHHSLDAVLARGDNAQIVADIRKDIDQVF
AKTKKAQDKGERNHFLSEIKSLRKELKEREETAMAAALTHASVVLATNTGASSDGPLKLL
PENHFDLVVIDECAQALEASCWIPLLKSPRCILAGDHKQLPPTIISHKAAAKGLSLSLME
RLIKRHGEKVVKMLTVQYRMHQAIMQWASLEMYGGQLTAHPSVAQHLLKDLPGVTSTEET
TIPLLLVDTAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKAKDIAVVAPYNLQ
VDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRA
RRHVAVICDTRTVSNQAFLKRLVDYFSQHGEVRTAFEYLDDLVPENYTQEGRSERQQGAK
LSAAPGPKPQLPPGRKPKAAGTKPTCQKPEARFCPNTSGPERESPGTKDSASRFKAMLVA
FLESSEMRLDFPPSLSSHDRMLVHLMAEEYGLQHVSTGEGRDRYISVCKKEPAKPLLPAA
APPSKQLPLPQPQHPSRETPVPPEPGGSSKGSGKVDLKSLHLERVQREKARQEEATRKAQ
EPSACLQGSSRKKDKCEAKGKAAAKSRADGVAEEDIDALISAAIKADNTCGFPCCKASIT
TLGQLCLHCNRRYCLSHHIPEVHGCGEKAKAQARQRISREGVLYPGSGSKDKSLDPAKRA
QLQRRLDKKLSELTGQRKGKKKDKEK
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcggcggagcggcacctggagctgctgcgggaggagcgggaggccgag
ctcgccgagagcagggcatggcaggaaagcatctccctgaaggaactgcagcgcagaggt
gtctgcctgctaaaactccaagctgccagccagagaactggcctctacggacggctgctt
gtgacgtttcagcctagaaaatatgattcagatgcggagctgccctataacagttttggg
cctggagatattgtgggcctttacgattcagctggccacaatgatccgctctccaccggc
attgtaacacgtatcacctccaaagcagtgactgttgcctttgaggagtctcgagatggc
atgctgagcttggaccgagagtgctcttaccgcctgctgaaattagccaatgatgtcacc
tacaacaggctgaaaaaagctttaaatgcactaaagcagtatcacagcggtccagcctcc
aatctgatcgacgtcctcttcttctcttcggatccaagcacattcaatgaaacaaagcct
ctaaagctttacaatgactcgctggatgcatcgcagagggaagctgtctccttctcactg
gctcagagggagcttgccatcatccatggaccacctggcacagggaagaccacaacacta
gtagagatcatcttgcaagctgtacagcagggcctgaaagtcctgtgttgtgccccatcc
aacgttgctgtggataacctggtggaaaggctggctggctgcaaagcccgcatcctgcgg
ctagggcaccccgctcgcttgctggagccaatccaacaccattccttggacgcagtcttg
gcccgtggtgacaatgcccagatagtggcagatatcaggaaggacatcgaccaggtcttt
gcaaaaactaaaaaggctcaagacaagggagagcggaaccattttctcagtgaaattaag
tcactgagaaaggagctgaaggaacgagaagaaactgccatggctgcagcccttacccat
gccagtgttgtccttgctacgaatacaggtgcttcctctgatggcccactaaagctgctt
cctgaaaatcactttgatcttgtggtgatagatgagtgcgctcaggccctggaagccagt
tgctggatacctctgctgaagtctccgaggtgtatccttgctggggatcacaaacagctt
cctcccaccatcatctctcacaaggctgctgccaagggcctttcactcagcttgatggag
cgtctcatcaagaggcacggggagaaggttgtgaagatgctgacagtgcagtaccgaatg
caccaggccatcatgcagtgggcttccttggagatgtacggcggccagctcactgctcac
ccatcagtagcccagcatttgcttaaggacctgccgggcgtcacctctacagaagagacc
acaattcccttattgcttgtagacactgctggctgtggcctgtttgagctggaagtggaa
gatgaacagtctaaggggaatccaggggaggtgcagctggctggtttgcacatccaagcc
ttggtggaagctggtgtgaaagcaaaagacatcgctgtcgtagctccctacaacctccag
gtggacatgctaagagagcacctttgccacaggtacccagagctagaaattaaatcagtt
gatggtttccaaggaagagagaaggaggcagtgatcctgtcattcgtgagatccaacagg
aaaggtgaggtgggctttcttgcagaagaccggcggataaacgtagcggtgacccgcgcc
cggcgccacgtggctgtcatctgtgacacccgcactgtcagcaaccaagcctttctgaag
cggctggtggattatttcagccagcacggggaggtacggacagccttcgagtacctcgat
gacctcgtgcctgaaaattacacccaggagggccgcagcgagcggcagcaaggtgcaaag
ctttctgcagcacctggccccaaaccacagctgcctccagggaggaaacccaaagcagca
ggaaccaaaccaacgtgtcagaagccagaagcacgtttctgcccaaacacaagtggtcct
gagagagagagcccagggacaaaagacagtgccagcagattcaaggctatgctggtggcc
ttcctggagagcagcgagatgcgtttggacttccccccatcgctcagttctcacgatcgg
atgctggttcacctaatggcagaggagtacgggctgcagcacgtgagcaccggggaaggg
agggaccggtacatcagcgtttgcaagaaagagcctgccaagcctttgctacctgcagcc
gccccccccagcaagcagctcccccttcctcagccgcaacatcccagcagggaaactcct
gtcccccctgagccaggaggaagcagcaagggctcagggaaagtggacctgaaaagcctg
cacttggagagggttcagagagagaaagccaggcaggaggaggcaacgaggaaggctcag
gagcccagtgcctgccttcagggcagcagcaggaaaaaagacaaatgcgaagccaaagga
aaggcagcagctaagagtagagcagacggtgtggcagaagaagatatcgacgctctgatc
tctgctgccattaaagctgacaacacatgtggcttcccctgctgcaaagccagcattaca
accctgggacagctttgcctccactgcaacagacgctactgcctcagccatcacatcccg
gaggttcatggctgtggggagaaggccaaggcgcaggcacggcagaggatcagcagggaa
ggggttctctatcctgggagcggctccaaagacaagtccctggacccagccaagagagcc
cagctccagcggcgcctggacaagaagctcagtgaactgaccggccagagaaagggcaaa
aagaaagacaaggagaaatga
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