Falco cherrug (Saker falcon): 102050906
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Entry
102050906 CDS
T02911
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03013
Nucleocytoplasmic transport
fch03015
mRNA surveillance pathway
fch03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102050906
09122 Translation
03013 Nucleocytoplasmic transport
102050906
03015 mRNA surveillance pathway
102050906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102050906
03041 Spliceosome [BR:
fch03041
]
102050906
03009 Ribosome biogenesis [BR:
fch03009
]
102050906
03012 Translation factors [BR:
fch03012
]
102050906
Enzymes [BR:
fch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102050906
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102050906
mRNA cycle factors
Stress granule specific factors
102050906
Spliceosome [BR:
fch03041
]
Complex C
Other components
EJC/TREX
102050906
Ribosome biogenesis [BR:
fch03009
]
Eukaryotic type
90S particles
Helicases
102050906
Translation factors [BR:
fch03012
]
Eukaryotic type
Initiation factors
eIF-4
102050906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
102050906
NCBI-ProteinID:
XP_027657553
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MKDVNPTAIPGGNSRIDILEDNGVQHAHTQVFCPKSKPRDLAPSCLHDTGKQSIRREAEQ
RTGPSALPSAHDIYISLSGLVRGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSI
SVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLD
YGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV
VLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT
LTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLIST
DVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQ
YYSTQIDEMPMNVADLI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtaaatcctactgcaatcccaggggggaattctaggatagatattctggaa
gataatggagtgcagcatgcccacacccaagtcttctgccccaaaagcaaacccagagac
ctggctcccagctgcctgcatgacacgggcaaacagagcatcagaagagaggcagagcaa
cgcacgggcccttctgccctgccctctgctcacgacatctacatctcactcagcggcctt
gtccgagggttcgagaagccgtcggccatccagcagagagccatcaagcagatcatcaag
gggagagacgtgatcgcgcagtcacagtcaggaacagggaagacagcaacattctccatc
tctgttctgcagtgcctggacatacaggttcgtgagacccaggcattgatcttggcacca
actcgggagctggctgtacagattcagaagggtcttcttgctctgggagactacatgaac
gtccagtgccatgcctgcattggagggaccaatgttggcgaagatatccgaaaactcgac
tatggacagcatgtcgttgctggcacgccaggccgtgtgtttgatatgattcgtcgtcga
agtttaaggacccgtgccatcaaaatgctggttttggatgaagcagatgaaatgctcaat
aaaggttttaaggagcagatctatgatgtgtacagatacttgcctccagctacgcaggtg
gtcctgatcagcgccactttgcctcatgaaattctggagatgaccaacaaattcatgaca
gaccccattcgcatcttggtgaaacgtgatgagttgacccttgaaggaatcaagcagttc
tttgtggctgtggaaagggaagaatggaagtttgacaccttgtgcgatctctacgacacg
ctcacaatcacccaggctgtcatcttctgtaacaccaagagaaaggtagactggctcacg
gagaagatgagagaagccaacttcacggtttcgtccatgcatggggacatgccgcaaaag
gagagggagtccatcatgaaagagttcagatctggtgcaagccgagtccttatttcaaca
gatgtttgggctagaggcctggatgtgcctcaggtgtcccttatcattaattacgacttg
cccaacaacagagagctctacatacacagaattggccggtcaggcagatacggccgaaaa
ggtgtagcgatcaactttgtgaagaatgatgacatccgcatcctgcgagacattgagcag
tactactccacccagatagacgagatgccgatgaacgttgccgatcttatctga
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