Falco cherrug (Saker falcon): 102051227
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Entry
102051227 CDS
T02911
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03015
mRNA surveillance pathway
fch03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102051227 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102051227 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102051227 (CPSF6)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102051227 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102051227
NCBI-ProteinID:
XP_027668527
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MSMEVLRKREKWRTWGEGSRRWKGYKEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMD
SLPPSVGDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKF
FENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKT
TQSGQMSGEGKAGPPGGSSRAAFPPSNRGRGRFPGAIPGGDRFPGPAGPGGPPPPFPAGQ
TPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPP
GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPA
PHVNPAFFPPPANSGIPTSDSRGPPPTDPYGRPPPYDRGDYGPPGRRFTGNNMSIREKLH
IPFYGRHTKNNTQNSGREMDAARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggaggtcttgagaaagcgggagaagtggaggacttggggagaagggtctcga
aggtggaagggttataaggaagctgaatatggtgggcatgatcagattgatttatatgat
gatgtaatttctccatctgcaaataatggagatgccccggaagatcgtgattacatggat
tctctcccaccatctgttggggatgatgtaggtaaaggagctgcaccaaatgttgtctat
acatatactggaaagagaattgccttgtacattggaaatcttacttggtggacaacagat
gaagacttaaccgaagcagttcattcactgggggtaaatgatattttggagataaaattt
tttgaaaatcgtgctaatggccagtctaaagggtttgcccttgtgggtgtgggatcggaa
gcatcctctaaaaagttgatggatttgttgcctaaaagagaactgcatggacaaaatcct
gttgtaactccatgtaataaacaatttctgagtcagtttgaaatgcagtcaagaaaaacc
acacaatctggccagatgtccggggaaggtaaagctggtcccccaggaggaagctcacga
gcagcatttccacctagtaatagagggcgaggccgttttccaggtgccattccaggtgga
gacagattccctgggccagcagggccaggagggccgccaccacctttcccagctggacaa
actcccccgcgtccacctttaggtcctcctggcccaccaggcccaccaggccctccacct
cctggtcaggtcctcccacctcctttagctggacctcctaatcgtggtgaccgtccacca
ccaccagttctgtttccaggacaaccttttggtcagcctccacttgggcctcttcctcca
ggccctccaccaccagttccaggctacgggccaccaccaggtccaccaccacctcagcag
ggtccacctccacctccgggtccatttccccctcgtccacctggccctcttgggccaccc
ctgactcttgctcctcctccacatctccctgggccacctccaggtgctccaccacctgca
ccacatgtgaatccagctttcttccccccacctgccaatagtggcatacctacttcagac
agccgtggcccgcctccaacagatccatatggccgacctccaccatatgacagaggtgac
tatgggccacctggaaggcgtttcactggaaataacatgtccataagagaaaaattacat
attccattctatgggaggcacacgaaaaataatactcaaaactcagggagagaaatggat
gctgcaaggacacctctaagtgaagcagaatttgaagaaattatgaatagaaatagggcg
atctcaagcagtgccatttcaagagctgtatcagatgccagtgctggggactatggaagt
gctatagagaccttggtaactgcaatttccttaattaaacagtccaaagtatctgcggat
gatcgctgtaaagtacttattagctctcttcaggactgccttcatggaattgagtccaag
tcttatggttctggatccagaagacgtgagcgatccagagagagggaccacagtaggtca
cgagaaaaaagtaggcgccacaaatcacgtagtagagatcgtcatgatgactattaccgg
gaaagaagccgtgaaagagagaggcatcgtgatcgcgacagagatcgcgacagagaacga
gacagagagagagaatatcgtcatcgttaa
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